FFCP PHASE1:Hg19::chr12:57873298..57873307,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |||
|TSSclassifier=strong | |||
|UniProt=E9PDX9 | |||
|association_with_transcript=107bp_to_ENST00000424809_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_12_at_ARHGAP9_5end | |||
|id=chr12:57873298..57873307,- | |||
|ontology_enrichment_celltype=CL:0000738!2.56e-28!140;CL:0000037!3.66e-26!172;CL:0000566!3.66e-26!172;CL:0000988!4.91e-24!182;CL:0000791!1.80e-23!18;CL:0000789!1.80e-23!18;CL:0002420!1.80e-23!18;CL:0002419!1.80e-23!18;CL:0000790!1.80e-23!18;CL:0000838!4.71e-22!52;CL:0000542!1.62e-21!53;CL:0000051!1.62e-21!53;CL:0002087!2.76e-20!119;CL:0002032!1.69e-19!165;CL:0000837!1.69e-19!165;CL:0002031!2.10e-17!124;CL:0000084!5.58e-16!25;CL:0000827!5.58e-16!25;CL:0000625!1.56e-15!11;CL:0000623!3.62e-10!3;CL:0000825!3.62e-10!3;CL:0000767!6.67e-10!3;CL:0000842!7.49e-10!3;CL:0000784!2.27e-09!3;CL:0000134!5.36e-08!358;CL:0002320!1.29e-07!365;CL:0000224!1.84e-07!4;CL:0000624!1.91e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.26e-30;3!CL:0000767;2.40e-29;3!CL:0000226;5.70e-29;3!CL:0000842;5.70e-29;3!CL:0000094;2.18e-19;8!CL:0000625;3.23e-14;11!CL:0000081;3.58e-14;11!CL:0000791;3.74e-13;18!CL:0000789;3.74e-13;18!CL:0002419;3.74e-13;18!CL:0000084;1.95e-09;25!CL:0000542;4.60e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.43e-30,3;CL:0000825,3.43e-30,3;CL:0000767,2.64e-29,3;CL:0000226,3.88e-29,3;CL:0000842,3.88e-29,3;CL:0000094,2.23e-19,8;CL:0000738,1.57e-17,136;CL:0000037,1.46e-15,168;CL:0000988,1.23e-14,177;CL:0000625,2.96e-14,11;CL:0000081,3.64e-14,11;CL:0000791,3.84e-13,18;CL:0000789,3.84e-13,18;CL:0002420,3.84e-13,18;CL:0002419,3.84e-13,18;CL:0000790,3.84e-13,18;CL:0000838,6.80e-11,52;CL:0000542,1.14e-10,53;CL:0000051,1.14e-10,53;CL:0002087,5.29e-10,115;CL:0000084,1.99e-09,25;CL:0000827,1.99e-09,25;CL:0002032,2.61e-09,161;CL:0000837,2.61e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;3.74e-13;18!CL:0000051;4.60e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.97e-11!15;UBERON:0000179!5.97e-11!15;UBERON:0000463!5.97e-11!15;UBERON:0002193!2.94e-10!112;UBERON:0002390!8.19e-10!102;UBERON:0003061!8.19e-10!102;UBERON:0002384!4.21e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,6.90892916574983,1.08371286321253,0,0,0,0,0.142169232487422,0.293600439334847,2.21598163412751,0.601633342410425,0.651032612147555,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,1.32171328579026,2.24203425192614,0,0.196709770113833,0.393010762749165,1.02800749499755,0,0,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0.541607727530031,0,0,0,0,0,0.14828656316206,0,0,0,0,1.71813722741315,0,0,0.651083453856419,1.90090408889675,0.150575119077773,0,0,0.236777252044017,0.821127996921047,4.43534835094411,4.81392352410313,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,6.89607660706745,5.82194452120697,8.72732646702289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,1.72571360654893,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0.399158742865633,0.5745161103971,1.2700414963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0.320568492303233 | |||
|short_description=p12@ARHGAP9 | |||
}} |
Revision as of 14:11, 11 January 2014
Short description: | p12@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARHGAP9_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 107bp_to_ENST00000424809_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | E9PDX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.43e-30 | 3 |
pro-NK cell | 3.43e-30 | 3 |
basophil | 2.64e-29 | 3 |
single nucleate cell | 3.88e-29 | 3 |
mononuclear cell | 3.88e-29 | 3 |
granulocyte | 2.23e-19 | 8 |
leukocyte | 1.57e-17 | 136 |
hematopoietic stem cell | 1.46e-15 | 168 |
hematopoietic cell | 1.23e-14 | 177 |
CD8-positive, alpha-beta T cell | 2.96e-14 | 11 |
blood cell | 3.64e-14 | 11 |
mature alpha-beta T cell | 3.84e-13 | 18 |
alpha-beta T cell | 3.84e-13 | 18 |
immature T cell | 3.84e-13 | 18 |
mature T cell | 3.84e-13 | 18 |
immature alpha-beta T cell | 3.84e-13 | 18 |
lymphoid lineage restricted progenitor cell | 6.80e-11 | 52 |
lymphocyte | 1.14e-10 | 53 |
common lymphoid progenitor | 1.14e-10 | 53 |
nongranular leukocyte | 5.29e-10 | 115 |
T cell | 1.99e-09 | 25 |
pro-T cell | 1.99e-09 | 25 |
hematopoietic oligopotent progenitor cell | 2.61e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.61e-09 | 161 |