FFCP PHASE1:Hg19::chr13:25345488..25345491,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:25345488..25345491,+ | |||
|id=chr13:25345488..25345491,+ | |||
|ontology_enrichment_celltype=CL:0000054!2.00e-13!2;CL:0000137!2.00e-13!2;CL:0000092!2.00e-13!2;CL:0000864!1.85e-07!1;CL:0000091!1.85e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.69e-18;4!UBERON:0007284;8.69e-18;4!UBERON:0009117;6.13e-08;10!UBERON:0005564;6.13e-08;10 | |||
|ontology_enrichment_disease=DOID:200!2.00e-13!2;DOID:4305!2.00e-13!2;DOID:0060085!1.27e-07!1;DOID:3165!1.27e-07!1;DOID:0060121!1.27e-07!1;DOID:2438!1.27e-07!1;DOID:4418!1.27e-07!1;DOID:3571!1.85e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.69e-18;4!DOID:1325;8.99e-11;7!DOID:3904;8.99e-11;7!DOID:3905;1.12e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.69e-18,4;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0003135!7.60e-09!11;UBERON:0002134!1.12e-07!1;UBERON:0005208!1.12e-07!1;UBERON:0005946!1.12e-07!1;UBERON:0005965!1.12e-07!1;UBERON:0002078!1.12e-07!1;UBERON:0001282!1.97e-07!1;UBERON:0009842!1.97e-07!1;UBERON:0003704!1.97e-07!1;UBERON:0001171!1.97e-07!1;UBERON:0001172!1.97e-07!1;UBERON:0001301!2.84e-07!1;UBERON:0000473!3.04e-07!8;UBERON:0001280!5.05e-07!4;UBERON:0004647!5.05e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.39e-66;1!UBERON:0005208;2.39e-66;1!UBERON:0004145;2.39e-66;1!UBERON:0005946;2.39e-66;1!UBERON:0005965;2.39e-66;1!UBERON:0002078;2.39e-66;1!UBERON:0002081;5.04e-34;2!UBERON:0002133;5.04e-34;2!UBERON:0003978;3.27e-23;3!UBERON:0004151;3.27e-23;3!UBERON:0000946;3.27e-23;3!UBERON:0000473;1.35e-09;8!UBERON:0010313;6.13e-08;10!UBERON:0003135;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.66e-66,1;UBERON:0005208,4.66e-66,1;UBERON:0005946,4.66e-66,1;UBERON:0005965,4.66e-66,1;UBERON:0002078,4.66e-66,1;UBERON:0002081,7.05e-34,2;UBERON:0002133,7.05e-34,2;UBERON:0010227,7.05e-34,2;UBERON:0003978,4.09e-23,3;UBERON:0009751,4.09e-23,3;UBERON:0004151,4.09e-23,3;UBERON:0000946,4.09e-23,3;UBERON:0002523,4.09e-23,3;UBERON:0005983,4.09e-23,3;UBERON:0004145,4.09e-23,3;UBERON:0002165,4.09e-23,3;UBERON:0002062,4.09e-23,3;UBERON:0007280,4.09e-23,3;UBERON:0004797,9.89e-11,7;UBERON:0000473,1.24e-09,8;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0003135,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.548167698587004,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,1.81155412280008,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0.0757786982182394,1.87574891109325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:25345488..25345491,+ | |||
}} |
Revision as of 16:59, 11 January 2014
Short description: | p@chr13:25345488..25345491, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:25345488..25345491, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 4.66e-66 | 1 |
right atrium valve | 4.66e-66 | 1 |
outflow tract of atrium | 4.66e-66 | 1 |
outflow part of right atrium | 4.66e-66 | 1 |
right cardiac atrium | 4.66e-66 | 1 |
cardiac atrium | 7.05e-34 | 2 |
atrioventricular valve | 7.05e-34 | 2 |
future cardiac atrium | 7.05e-34 | 2 |
valve | 4.09e-23 | 3 |
cardiac mesenchyme | 4.09e-23 | 3 |
cardiac chamber | 4.09e-23 | 3 |
cardial valve | 4.09e-23 | 3 |
tunica intima | 4.09e-23 | 3 |
heart layer | 4.09e-23 | 3 |
outflow tract | 4.09e-23 | 3 |
endocardium | 4.09e-23 | 3 |
endocardial cushion | 4.09e-23 | 3 |
presumptive endocardium | 4.09e-23 | 3 |
blood vessel layer | 9.89e-11 | 7 |
testis | 1.24e-09 | 8 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
male reproductive organ | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.69e-18 | 4 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |