FFCP PHASE1:Hg19::chr14:52535456..52535466,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:52535456..52535466,- | |||
|id=chr14:52535456..52535466,- | |||
|ontology_enrichment_celltype=CL:0000055!1.32e-08!180;CL:0000183!2.00e-08!59;CL:0000187!5.75e-08!54;CL:0000680!5.99e-08!57;CL:0000056!5.99e-08!57;CL:0000355!5.99e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002591;8.01e-18;1!CL:0000632;5.97e-07;3!CL:0000746;5.97e-07;3!CL:0002504;8.38e-07;3!CL:1000279;8.38e-07;3!CL:0002144;8.38e-07;3!CL:0002577;8.38e-07;3!CL:0002590;8.38e-07;3!CL:1000280;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.22e-17,1;CL:0000632,5.80e-07,3;CL:0000746,6.14e-07,3;CL:0000513,6.14e-07,3;CL:0002577,6.50e-07,3;CL:0002590,6.88e-07,3;CL:0002144,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.01e-18;1!UBERON:0004140;8.01e-18;1!UBERON:0007297;1.38e-09;2!CL:0000513;5.97e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!8.23e-09!11;UBERON:0006876!8.23e-09!11;UBERON:0002385!3.10e-08!63;UBERON:0001015!3.10e-08!63;UBERON:0000383!3.10e-08!63;UBERON:0000119!3.19e-08!312;UBERON:0001134!6.22e-08!61;UBERON:0002036!6.22e-08!61;UBERON:0003082!6.22e-08!61;UBERON:0005284!7.84e-08!5;UBERON:0000483!1.00e-07!309;UBERON:0000481!1.78e-07!347;UBERON:0000490!2.67e-07!138;UBERON:0000468!7.09e-07!659;UBERON:0004290!7.99e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;8.01e-18;1!UBERON:0000998;8.01e-18;1!UBERON:0006868;8.01e-18;1!UBERON:0000078;1.38e-09;2!UBERON:0002012;1.38e-09;2!UBERON:0008886;1.38e-09;2!UBERON:0010523;8.38e-07;3!UBERON:0001915;8.38e-07;3!UBERON:0006947;8.38e-07;3!UBERON:0001982;8.38e-07;3!UBERON:0004054;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,5.26e-18,1;UBERON:0006868,5.26e-18,1;UBERON:0000078,1.71e-09,2;UBERON:0007497,1.71e-09,2;UBERON:0003643,1.71e-09,2;UBERON:0003504,1.71e-09,2;UBERON:0003469,1.71e-09,2;UBERON:0003496,1.71e-09,2;UBERON:0002012,1.71e-09,2;UBERON:0008886,1.71e-09,2;UBERON:0007303,1.71e-09,2;UBERON:0002061,1.71e-09,2;UBERON:0005432,1.71e-09,2;UBERON:0004363,1.71e-09,2;UBERON:0006947,7.28e-07,3;UBERON:0004054,7.28e-07,3;UBERON:0000948,8.09e-07,24;UBERON:0005498,8.09e-07,24;UBERON:0004140,8.09e-07,24;UBERON:0009881,8.09e-07,24;UBERON:0004141,8.09e-07,24;UBERON:0003084,8.09e-07,24;UBERON:0007005,8.09e-07,24;UBERON:0004139,8.09e-07,24;UBERON:0004291,8.09e-07,24;UBERON:0010523,8.62e-07,3;UBERON:0001915,8.62e-07,3;UBERON:0001982,8.62e-07,3;UBERON:0004145,9.64e-07,3 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0.495065411840187,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0,1.20848795132744,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.759783069987479,0.132409180813219,0.573673241497627,0,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0.516628905878827,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0.276149695926898,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.57191197463259,1.08524321078289,0,0,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0,0,0.34444334449382,0.182091168006717,0.393373244878272,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616194468458578,0.460511024178389,0.275673144969061,0.322260734604821,0.145016693914229,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,1.48863347743867,0.316379424718726,0.571890581771475,0.511795582622668,0.855877976067841,0.636406495851874,0,0.539617372749944,0,1.06031162111118,0,0,0,0,0,0,0,0.707027159768564,1.13008116620243,0,0,0,0.578775534266688,0.655894752046633,0,0,0.845086807596724,0.286822704408103,0.196498082026242,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0.429226048136571,0,1.20930250476107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.419636705079985,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.643288897589907,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,1.27016115057279,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0.924351257262837,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.952257725854961,0,0.0620747142958579,0.112131862580613,0.318235791390825,0.606351566874658,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0.201273793591026,0 | |||
|short_description=p@chr14:52535456..52535466,- | |||
}} |
Revision as of 20:07, 11 January 2014
Short description: | p@chr14:52535456..52535466, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:52535456..52535466, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.22e-17 | 1 |
hepatic stellate cell | 5.80e-07 | 3 |
cardiac muscle cell | 6.14e-07 | 3 |
cardiac muscle myoblast | 6.14e-07 | 3 |
placental epithelial cell | 6.50e-07 | 3 |
smooth muscle cell of the brain vasculature | 6.88e-07 | 3 |
capillary endothelial cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 5.26e-18 | 1 |
seminal fluid secreting gland | 5.26e-18 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.71e-09 | 2 |
developing epithelial placode | 1.71e-09 | 2 |
respiratory system arterial blood vessel | 1.71e-09 | 2 |
respiratory system blood vessel | 1.71e-09 | 2 |
respiratory system artery | 1.71e-09 | 2 |
head blood vessel | 1.71e-09 | 2 |
pulmonary artery | 1.71e-09 | 2 |
pulmonary vascular system | 1.71e-09 | 2 |
pharyngeal vasculature | 1.71e-09 | 2 |
truncus arteriosus | 1.71e-09 | 2 |
aortic sac | 1.71e-09 | 2 |
pharyngeal arch artery | 1.71e-09 | 2 |
male genital duct | 7.28e-07 | 3 |
internal male genitalia | 7.28e-07 | 3 |
heart | 8.09e-07 | 24 |
primitive heart tube | 8.09e-07 | 24 |
primary heart field | 8.09e-07 | 24 |
anterior lateral plate mesoderm | 8.09e-07 | 24 |
heart tube | 8.09e-07 | 24 |
heart primordium | 8.09e-07 | 24 |
cardiac mesoderm | 8.09e-07 | 24 |
cardiogenic plate | 8.09e-07 | 24 |
heart rudiment | 8.09e-07 | 24 |
microcirculatory vessel | 8.62e-07 | 3 |
endothelium of capillary | 8.62e-07 | 3 |
capillary | 8.62e-07 | 3 |
outflow tract | 9.64e-07 | 3 |