FFCP PHASE1:Hg19::chr17:5372175..5372223,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16718 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H6R0 | |||
|association_with_transcript=0bp_to_ENST00000225296,uc002gca.2,uc002gcb.2,uc010clf.2_5end | |||
|description=CAGE_peak_3_at_DHX33_5end | |||
|id=chr17:5372175..5372223,- | |||
|ontology_enrichment_celltype=CL:0000066!6.09e-22!254;CL:0000223!5.95e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000240;3.76e-07;6!CL:0000311;3.76e-07;6!CL:0000079;3.76e-07;6!CL:0000237;3.76e-07;6!CL:0002322;4.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.22e-23,253;CL:0000223,3.53e-08,58;CL:0002322,4.83e-07,5;CL:0000240,5.20e-07,6;CL:0000311,5.20e-07,6;CL:0000079,5.20e-07,6;CL:0000237,5.20e-07,6;CL:0000036,5.20e-07,6;CL:0000357,5.20e-07,6;CL:0000114,5.20e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.15e-08;29!CL:0000357;3.76e-07;6!CL:0000114;3.76e-07;6 | |||
|ontology_enrichment_disease=DOID:162!4.37e-34!235;DOID:14566!1.29e-33!239;DOID:0050687!4.69e-25!143;DOID:305!1.56e-23!106;DOID:0050686!7.06e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:305;6.77e-09;106!DOID:0050687;2.67e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.98e-37,235;DOID:14566,1.42e-35,239;DOID:0050687,3.71e-27,143;DOID:305,2.48e-25,106;DOID:0050686,4.88e-11,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.29e-07;9!UBERON:0001557;1.29e-07;9!UBERON:0004807;1.46e-07;22!UBERON:0000072;1.47e-07;37!UBERON:0010371;6.94e-07;31!UBERON:0000065;7.58e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,2.06e-08,38;UBERON:0003258,2.06e-08,38;UBERON:0001737,6.90e-08,9;UBERON:0001004,6.59e-07,74;UBERON:0000072,7.40e-07,47 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0.982935746006035,0,0.218441372130172,0.527533956456907,0,0,0,1.20538905604795,0.730310090387373,0,0.492484232307152,0.612002073732759,0,0.572471974262113,0.958120975510189,0.87879847716362,2.75088260692625,5.66494067204626,4.171671409625,0,0,0.154816123316076,1.83884244895785,1.50602959389125,2.21852406100073,9.76086727311801,7.53496932183334,0.880801318004542,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0.790152254325231,0.983548850569165,0.786021525498329,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.222820913770347,0,0.221533894583621,1.08321545506006,0.25618263945135,0,0.328875809207352,0,0,0,0,1.04535523804977,0.339928028092699,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,1.06976078313403,1.01377082717959,0,0.670700859703636,0.383587685530591,0,0,0.869079113764942,0,0,1.41802225746102,1.77383517970051,1.93236528524877,0.785874452986276,0,0.370784442784429,0,0,0,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0,0.419499436209906,1.10047216776027,0.835979866147242,0,0,0.33472061276467,0,0,0.732186172644509,0.367663080345869,0,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0.872188104285069,0,0.633152558322899,0.662045904066094,0.573673241497627,1.77334191099179,0,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0.490385709340376,0.454072282934794,0.576175924479999,0.234321431833797,0.624320153660641,0,0.448346041655403,0.352303495931295,0.647491777472526,0.280901613404497,0.408308342509787,0.491337269247072,0,0,0,0,0,0.336672227908132,0.750711119231785,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,1.00973509697646,0.0920498986422993,0,0,0,0,1.15956511897978,1.36373060295417,2.00763216772303,8.66013313520127,8.61443494089654,8.24976994373581,4.87206958572241,8.57890892977137,7.2995471815166,0,0.643240938192885,0,0,0,1.65629520055781,3.03452442140583,3.85617647813571,3.08823123650703,2.83243277320128,3.79632990577755,1.61797569792197,2.15843611637881,1.53898862778556,0,0,0.8231480226628,0,1.26755034821831,0.982827216677626,0,0.441463099414651,0.860919069801795,0.171567810298526,4.2802611309364,3.37205259772859,3.01586917234893,2.31471112896324,0.325808305310325,0,0,1.39116485970092,0.234817388471643,1.01056513432752,0,0.761016608938393,0,0.858486162094873,0,0.234004265139238,0,0,0.503946384596579,1.27597587518148,2.5971971583826,3.19697332365358,3.06706143332169,1.47798971368783,0,0,0.144119953416961,0.50496973370552,0.825472625798197,0,0,0,0.411309970813294,0.300343057843917,0,0.224262168690721,0,0.2933531432838,0.258543431515556,0,0,0,0,0.257207374262142,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.179060963239896,1.12085143993527,0.394061520403854,0.431255149719035,0.256686072559497,0,1.30139853857622,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0.49076596687656,0,0.542530047399471,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,1.03473071292505,1.32845119707087,1.10621501125022,0.173767228936166,0,0,0,0,0.320182673410333,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.410635780069046,0.519254429183621,0.813472649219715,2.29632954224082,0,0.552485933615378,0.229628896329213,0.182091168006717,0,1.80479845162965,0.924184045252977,3.13739907670742,1.46139224653261,1.58327443339314,0,0.680374821106063,0.863663664408557,0,0.541892875087706,0.501689773854853,0.764628819135115,0.831076008928724,2.46262230194396,0.219259876645935,0.261435451024901,1.02580050046556,1.96808787419823,2.60302715731442,0.412164046590889,0.824125183365091,1.48517099857058,3.44559322797703,2.60024098414608,0,0.096670718292122,1.07834031980251,0.921022048356777,0.827019434907183,0.214840489736547,0.435050081742686,1.36362603865761,0,0.991709492165869,2.49847087574638,3.44554323735377,0.708104465988849,0,0.31481234683064,0,0.924100740528266,0,0,0.37064843820784,0.143124886741991,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,1.06031162111118,1.01091240786658,1.58510321173008,0,0.48763373908959,0,0,0.136499911407986,0.565621727814851,0,0,0.66343897524122,0.876901770507525,0,0,0.608731130888112,0.6196469961995,0.563391205064483,0.573645408816206,0.0982490410131212,0.7133421029625,0,0,0,0,0.349934720244983,1.34710957815717,1.34060455107157,0,0,2.15252686335615,0,0.886860307073351,0.918893600827838,0.507447609232169,0,0,0,0,0,0,0,2.99107399156925,0,2.45040215981032,1.48642540100575,4.90515324119912,2.91681557728498,2.39139409093234,4.19116680008915,0.766021480529467,0.423347165447766,0,0.280797178113459,1.82587743226554,2.50687833236837,0,2.37008488922245,1.76646882614069,0.403599414382095,0,1.37402137902306,0,0,0.333698283423817,1.17232857241224,0,1.23087398947712,0.540911356951966,0.66614393599564,0,1.12284324244932,0.146508179271894,1.57768678274367,1.44876399560722,2.84136146806413,0,0.593929361665277,0,0,0.281338832821026,0.111308705022906,2.30725423917463,8.02276550886375,0.19924798825107,1.10513566212459,4.03092396566842,3.27259784006895,1.84627208191604,0,2.15684042753584,0.358042349351218,0,0,0,0,0.969332746095218,0.371072392647405,1.99613798001194,1.04171104434093,0.174919999992391,0.724999575434793,2.16207551742449,0.762760950878299,2.83665218121524,3.10269035917318,0.291604613383254,1.38899995946634,0.885741385813839,0.723578631752448,0,0.331737779793674,0.295547618953547,0.658156191461918,2.1787692703798,2.23077990845765,0,0.569710279235006,2.76676685265672,3.14151755434202,0.434589487688032,0,0.641183153813036,0,0,0.31396051279005,1.32969345520125,1.1279783030859,1.9606253431774,0.503464760927528,3.22581345631115,0.476809736941136,2.3209787098083,0.326465616318295,2.12029607150911,6.49165919226273,0,0.176915129006678,0,1.77912677208373,3.58335422944858,4.59456577824004,0.202203398942031,0,0.702793337176017,5.65609846568565,1.76098157038881,1.69946265673865,0,0,0.61214552326098,0.189559738885464,5.56196651833622,4.76965680427337,0,0.992975867626496,1.2557316736289,1.19472429772959,2.27687636823834,0,0.520679215005393,0.587954384486266,2.61177619741208,0,0.51595809741485,3.77349692027432,3.36210858596454,4.35211922382009,0.0969890164884194,0.264768380074501,0,1.64450309576101,0.794858446811959,1.13959432720582,0.586654148204409,0.881747022766871,0.426905989478705,1.9980960958213,0.432271251462318,3.20702469264564,0.686379991447858,3.45731515171559,0.49701014226173,0,0.543616824294456,1.67364554099733,1.32597682927218,0.866851769704557,0,0.410716136675979,2.55493176133945,0.859530882839914,3.15464825135177,0.279282401272254,0.229160424011684,1.43574604915363,1.99679000498991,0.429226048136571,0.223171457441873,0.403100834920358,0,5.82479747637269,7.64196868380069,5.52186251153815,6.94256501698104,0.885847333632739,5.24974658807864,0,0.408610218334727,8.68067001711104,5.36403802729212,6.23160507043778,0.449947783103001,0,0.728994679896296,2.34804281319486,0.0788057072991982,0.629455057619977,2.32320740342694,1.07572403599707,2.87872795979168,0.714695326373367,0,4.32256514013075,0.542999601753713,0,0.326587360109409,1.19730191562487,0.738832686744051,0.170388021785422,2.60617810496289,0.439656701034247,0,0.517131825446202,0.52893040697076,1.02652102730598,0.704815022316672,0.106787412567695,0,0,0,1.58089305518355,3.77557054980777,0,0,0,0,0,1.57054096250234,0,0.488105059607853,0.3755727921195,0,0.443716206147409,0.620964029413834,0.276697269872462,2.12466693535581,2.72968411574966,2.85465333544967,0.941063278792687,7.49335849291011,6.52144628748713,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0.621748802331122,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,0,0.521745061811734,0.300515217994437,0,0,0.545545977607678,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0,0,2.11881813448034,0.428883182749851,1.82696004375648,0.226705925512272,1.15761237161917,2.44736704506468,1.61179956973339,3.39681591877069,1.97355644620836,1.76689145945881,1.3503982678964,1.01365464391844,0.76872455576384,3.45430341731199,0.607719912354764,0.829550616910385,0.194860308839388,0,0,0,0.491545817507439,1.47918486351039,0.19998739585493,0.320075189082423,0.172214979660816,1.13503190713367,0.368211900503681,0.419638523158333,1.86623178009892,4.22051425302051,3.5582187760905,1.72992536041486,1.09209638192014,1.18812770967818,0.425149840203366,0.619678821295011,0,0,2.99674631004763,1.60114149657094,0,0,0.834979926253974,1.41696576325585,0.478901577171454,1.8460472781668,0.504143392443436,0.899044282034833,0.484426936895553,0,1.27592034051333,6.37036506077798,1.83428598521679,3.46576998451015,0,1.3807198521202,0.397832444232549,0.0752103283492573,1.0085253435176,0.781514011233092,1.83334686136996,1.80149109261106,0.443568258651136,0.810451015420736,0,0.413373593002368,0.951237152908602,0.546974809018219,0,0,0.527613733078862,1.27762427639595,0.535701835878287,0,0.606965604236632,0,0.354809480650555,0.806637912890455,0.342976018874837,0.339848664884159,0.855046056317038,2.12748913591143,1.33477682270483,0.156986185701028,1.25692471932802,1.12108865325516,0,0,0.47775168788705,0.285906176706625,7.58465336317088,1.62737995515375,0.695433089210318,0,1.65772931330429,1.19502933965765,0,0,0.354996002191696,0.852134047591577,0,0.22910686854405,0,0.955538938977433,0.782988022584546,0.392600934460972,1.5849330247695,0,0.410651227424988,1.1598144313382,0.485710993059139,3.74303141539369,2.58636007709779,0,4.5178432815584,3.62803705259916,1.20770274853339,0.0771741581079447,0.874238242015829,0.940634592723046,0,0.235676547101626,0.196308467114945,0.594092800654172,0.8453114551668,0.339854229375634,0.375935671919414,0.644578879735772,1.99882311849858,1.42843150884526,0.352894871715692,0.240724100067505,0,0,0.143339583151451,3.47097436825006,0.611923411718232,0,0,0,0,0,5.29898984307331,8.95977690102303,0.633492505057185,5.40540797632503,2.13773924212448,5.329904173021,3.76061308938563,0.606229585745915,3.21556956187414,0.829169439458779,0.310298987585686,0,0.23806443146374,0.322944549180031,0.31037357147929,1.00918676322552,0.12729431655633,0,0.435433495793923,0,0.5388164241167,0.286888821570705,0.332660356546013,3.5003405502719,1.06727345877715,0,1.07790242527904,2.34640942403454,0.244482888365733,0,0,0,3.8468219076388 | |||
|short_description=p3@DHX33 | |||
}} |
Revision as of 13:20, 20 January 2014
Short description: | p3@DHX33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DHX33_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000225296, uc002gca.2, uc002gcb.2, uc010clf.2_5end |
EntrezGene: | DHX33 |
HGNC: | 16718 |
UniProt: | Q9H6R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.22e-23 | 253 |
endodermal cell | 3.53e-08 | 58 |
embryonic stem cell | 4.83e-07 | 5 |
stratified squamous epithelial cell | 5.20e-07 | 6 |
keratin accumulating cell | 5.20e-07 | 6 |
stratified epithelial cell | 5.20e-07 | 6 |
keratinizing barrier epithelial cell | 5.20e-07 | 6 |
epithelial fate stem cell | 5.20e-07 | 6 |
stratified epithelial stem cell | 5.20e-07 | 6 |
surface ectodermal cell | 5.20e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 2.06e-08 | 38 |
endoderm of foregut | 2.06e-08 | 38 |
larynx | 6.90e-08 | 9 |
respiratory system | 6.59e-07 | 74 |
segment of respiratory tract | 7.40e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.98e-37 | 235 |
disease of cellular proliferation | 1.42e-35 | 239 |
cell type cancer | 3.71e-27 | 143 |
carcinoma | 2.48e-25 | 106 |
organ system cancer | 4.88e-11 | 137 |