FFCP PHASE1:Hg19::chr17:19920456..19920462,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr17:19920456..19920462,+ | |||
|id=chr17:19920456..19920462,+ | |||
|ontology_enrichment_celltype=CL:0002150!3.37e-21!3;CL:0000861!3.37e-21!3;CL:0000764!9.10e-15!2;CL:0000765!9.10e-15!2;CL:0000050!9.10e-15!2;CL:0000038!9.10e-15!2;CL:0000558!9.10e-15!2;CL:0000547!9.10e-15!2;CL:0000549!9.10e-15!2;CL:0000550!9.10e-15!2;CL:0000552!9.10e-15!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.37e-15;2!CL:0000558;2.37e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.37e-15,2;CL:0000765,2.37e-15,2;CL:0000050,2.37e-15,2;CL:0000038,2.37e-15,2;CL:0000558,2.37e-15,2;CL:0000547,2.37e-15,2;CL:0000549,2.37e-15,2;CL:0000550,2.37e-15,2;CL:0000552,2.37e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |||
|ontology_enrichment_disease=DOID:6193!5.40e-08!1;DOID:2355!1.06e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002771!4.35e-20!3;UBERON:0001905!7.40e-15!2;UBERON:0002757!7.40e-15!2;UBERON:0010134!7.40e-15!2;UBERON:0002784!7.40e-15!2;UBERON:0005408!7.40e-15!2;UBERON:0001899!7.40e-15!2;UBERON:0002780!2.51e-11!41;UBERON:0001890!2.51e-11!41;UBERON:0006240!2.51e-11!41;UBERON:0003080!4.97e-11!42;UBERON:0000200!2.50e-10!6;UBERON:0007023!3.80e-10!115;UBERON:0001049!1.14e-09!57;UBERON:0005068!1.14e-09!57;UBERON:0006241!1.14e-09!57;UBERON:0007135!1.14e-09!57;UBERON:0002616!2.73e-09!59;UBERON:0001869!6.85e-09!32;UBERON:0002791!1.32e-08!33;UBERON:0002020!2.46e-08!34;UBERON:0003528!2.46e-08!34;UBERON:0001893!2.46e-08!34;UBERON:0002022!5.05e-08!1;UBERON:0003112!6.19e-08!1;UBERON:0000032!6.19e-08!1;UBERON:0005253!6.19e-08!1;UBERON:0003128!6.19e-08!1;UBERON:0002241!6.19e-08!1;UBERON:0001703!6.19e-08!1;UBERON:0004761!6.19e-08!1;UBERON:0009617!6.19e-08!1;UBERON:0001874!6.63e-08!1;UBERON:0001871!7.23e-08!7;UBERON:0003296!7.36e-08!4;UBERON:0010133!7.36e-08!4;UBERON:0001950!1.15e-07!20;UBERON:0001882!1.21e-07!1;UBERON:0005403!1.21e-07!1;UBERON:0000955!1.35e-07!69;UBERON:0006238!1.35e-07!69;UBERON:0000369!2.28e-07!4;UBERON:0002435!2.28e-07!4;UBERON:0000204!2.28e-07!4;UBERON:0010082!2.28e-07!4;UBERON:0003056!3.17e-07!61;UBERON:0002619!5.59e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.37e-15;2!UBERON:0002757;2.37e-15;2!UBERON:0010134;2.37e-15;2!UBERON:0005408;2.37e-15;2!UBERON:0001899;2.37e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0003296;2.43e-08;4!UBERON:0010133;2.43e-08;4!UBERON:0002784;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-15,8;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0003135,2.07e-11,11;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0022423418079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56196651833622,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.290268993867255,0.511625219603299,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9432804721561,39.9266553932706,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:19920456..19920462,+ | |||
}} |
Revision as of 14:14, 20 January 2014
Short description: | p@chr17:19920456..19920462, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:19920456..19920462, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.37e-15 | 2 |
erythroblast | 2.37e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 2.37e-15 | 2 |
erythroid progenitor cell | 2.37e-15 | 2 |
reticulocyte | 2.37e-15 | 2 |
proerythroblast | 2.37e-15 | 2 |
basophilic erythroblast | 2.37e-15 | 2 |
polychromatophilic erythroblast | 2.37e-15 | 2 |
orthochromatic erythroblast | 2.37e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-15 | 8 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
male reproductive organ | 2.07e-11 | 11 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |