FFCP PHASE1:Hg19::chr17:26733604..26733619,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113235 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30521 | |||
|TSSclassifier=weak | |||
|UniProt=Q96NT5 | |||
|association_with_transcript=-374bp_to_NM_001242366,NM_080669_5end | |||
|description=CAGE_peak_4_at_SLC46A1_5end | |||
|id=chr17:26733604..26733619,- | |||
|ontology_enrichment_celltype=CL:0002619!6.51e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.64e-60;3!CL:0000123;3.34e-11;2!CL:0000242;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.98e-60,3;CL:0000242,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.34e-11;2 | |||
|ontology_enrichment_disease=DOID:169!2.80e-08!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-35!94;UBERON:0001016!1.39e-35!94;UBERON:0005743!4.95e-33!86;UBERON:0001017!1.52e-31!82;UBERON:0001049!2.75e-30!57;UBERON:0005068!2.75e-30!57;UBERON:0006241!2.75e-30!57;UBERON:0007135!2.75e-30!57;UBERON:0000955!5.84e-28!69;UBERON:0006238!5.84e-28!69;UBERON:0002780!5.24e-27!41;UBERON:0001890!5.24e-27!41;UBERON:0006240!5.24e-27!41;UBERON:0003080!3.46e-26!42;UBERON:0002616!5.68e-25!59;UBERON:0007023!6.24e-23!115;UBERON:0003075!4.82e-22!86;UBERON:0007284!4.82e-22!86;UBERON:0004121!2.35e-21!169;UBERON:0001893!6.33e-21!34;UBERON:0002020!7.65e-21!34;UBERON:0003528!7.65e-21!34;UBERON:0002346!1.38e-20!90;UBERON:0000924!1.63e-20!173;UBERON:0006601!1.63e-20!173;UBERON:0003056!3.17e-20!61;UBERON:0000153!1.11e-19!129;UBERON:0007811!1.11e-19!129;UBERON:0002791!2.17e-19!33;UBERON:0000033!4.41e-19!123;UBERON:0001869!2.60e-18!32;UBERON:0002619!1.30e-14!22;UBERON:0001950!3.37e-14!20;UBERON:0000956!1.74e-12!25;UBERON:0000203!1.74e-12!25;UBERON:0002308!1.16e-10!9;UBERON:0000125!1.16e-10!9;UBERON:0000200!6.32e-09!6;UBERON:0002298!9.38e-09!8;UBERON:0002420!6.37e-08!9;UBERON:0007245!6.37e-08!9;UBERON:0010009!6.37e-08!9;UBERON:0010011!6.37e-08!9;UBERON:0000454!6.37e-08!9;UBERON:0001894!1.05e-07!7;UBERON:0006222!1.05e-07!7;UBERON:0009663!1.20e-07!7;UBERON:0002771!7.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;4.86e-45;4!UBERON:0002435;4.86e-45;4!UBERON:0000204;4.86e-45;4!UBERON:0005383;1.82e-27;3!UBERON:0005382;1.82e-27;3!UBERON:0009663;4.10e-26;7!UBERON:0001874;1.88e-21;1!UBERON:0001882;5.16e-21;1!UBERON:0005403;5.16e-21;1!UBERON:0002420;1.73e-20;9!UBERON:0000125;1.73e-20;9!UBERON:0007245;1.73e-20;9!UBERON:0002308;1.73e-20;9!UBERON:0010009;1.73e-20;9!UBERON:0010011;1.73e-20;9!UBERON:0000454;1.73e-20;9!UBERON:0001873;3.34e-11;2!UBERON:0002791;1.63e-10;32!UBERON:0003528;2.50e-09;34!UBERON:0002020;2.50e-09;34!UBERON:0001893;6.83e-09;34!UBERON:0001869;9.27e-09;32!UBERON:0002780;4.52e-07;41!UBERON:0001890;4.52e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.60e-45,4;UBERON:0002435,3.60e-45,4;UBERON:0000204,3.60e-45,4;UBERON:0010082,3.60e-45,4;UBERON:0005383,1.39e-27,3;UBERON:0005382,1.39e-27,3;UBERON:0009663,3.45e-26,7;UBERON:0001874,1.53e-21,1;UBERON:0001882,5.16e-21,1;UBERON:0005403,5.16e-21,1;UBERON:0002420,1.52e-20,9;UBERON:0000125,1.52e-20,9;UBERON:0007245,1.52e-20,9;UBERON:0002308,1.52e-20,9;UBERON:0010009,1.52e-20,9;UBERON:0010011,1.52e-20,9;UBERON:0000454,1.52e-20,9;UBERON:0001873,3.02e-11,2;UBERON:0010122,3.02e-11,2;UBERON:0002791,5.47e-10,32;UBERON:0001869,5.47e-10,32;UBERON:0003528,1.95e-09,34;UBERON:0002020,1.95e-09,34;UBERON:0001893,1.95e-09,34;UBERON:0002780,6.48e-08,41;UBERON:0001890,6.48e-08,41;UBERON:0003080,6.48e-08,41;UBERON:0006240,6.48e-08,41;UBERON:0000955,3.33e-07,68;UBERON:0006238,3.33e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01523926815932,1.6194683300949,2.31818010870768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0.763976851116555,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,1.4471572635049,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.063186579628488,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.443175571691151,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.482259445395058,0.137539436597234,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.625954653532499,0,0.443716206147409,0.310482014706917,0.138348634936231,0,0,0.285465333544967,0,0,1.01444720027578,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.323474434190045,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,1.41304295212211,0,0,0.82046545696302,0.252071696221718,0.829887029570615,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.607838261565552,0,0.206686796501184,1.01465296310251,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0.475788130837822,0.986591603442736,0,0,0,2.35673384874003,0,0,0,0,0.214429632529969,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0.301925687133347,0.154348316215889,0,0,0,0.235676547101626,0.392616934229891,0.297046400327086,0,0,0.187967835959707,0,0,0,0.352894871715692,0,0,0,0.286679166302903,0,0.679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.551369397209069,0,0,0,0.829169439458779,0.310298987585686,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@SLC46A1 | |||
}} |
Revision as of 14:23, 20 January 2014
Short description: | p4@SLC46A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC46A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -374bp_to_NM_001242366, NM_080669_5end |
EntrezGene: | SLC46A1 |
HGNC: | 30521 |
UniProt: | Q96NT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.98e-60 | 3 |
Merkel cell | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 3.60e-45 | 4 |
striatum | 3.60e-45 | 4 |
ventral part of telencephalon | 3.60e-45 | 4 |
future corpus striatum | 3.60e-45 | 4 |
caudate-putamen | 1.39e-27 | 3 |
dorsal striatum | 1.39e-27 | 3 |
telencephalic nucleus | 3.45e-26 | 7 |
putamen | 1.53e-21 | 1 |
nucleus accumbens | 5.16e-21 | 1 |
ventral striatum | 5.16e-21 | 1 |
basal ganglion | 1.52e-20 | 9 |
neural nucleus | 1.52e-20 | 9 |
nuclear complex of neuraxis | 1.52e-20 | 9 |
nucleus of brain | 1.52e-20 | 9 |
aggregate regional part of brain | 1.52e-20 | 9 |
collection of basal ganglia | 1.52e-20 | 9 |
cerebral subcortex | 1.52e-20 | 9 |
caudate nucleus | 3.02e-11 | 2 |
future caudate nucleus | 3.02e-11 | 2 |
regional part of telencephalon | 5.47e-10 | 32 |
cerebral hemisphere | 5.47e-10 | 32 |
brain grey matter | 1.95e-09 | 34 |
gray matter | 1.95e-09 | 34 |
telencephalon | 1.95e-09 | 34 |
regional part of forebrain | 6.48e-08 | 41 |
forebrain | 6.48e-08 | 41 |
anterior neural tube | 6.48e-08 | 41 |
future forebrain | 6.48e-08 | 41 |
brain | 3.33e-07 | 68 |
future brain | 3.33e-07 | 68 |