FFCP PHASE1:Hg19::chr17:38074859..38074898,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55876 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23690 | |||
|TSSclassifier=strong | |||
|UniProt=B4DKK7 | |||
|association_with_transcript=0bp_to_ENST00000520542_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_GSDMB_5end | |||
|id=chr17:38074859..38074898,- | |||
|ontology_enrichment_celltype=CL:0000791!7.09e-12!18;CL:0000789!7.09e-12!18;CL:0002420!7.09e-12!18;CL:0002419!7.09e-12!18;CL:0000790!7.09e-12!18;CL:0000084!1.91e-10!25;CL:0000827!1.91e-10!25;CL:0000625!3.43e-08!11;CL:0000838!4.32e-08!52;CL:0000542!7.77e-08!53;CL:0000051!7.77e-08!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.13e-07;1!UBERON:0006242;4.13e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002294!2.00e-08!7;UBERON:0001173!2.00e-08!7;UBERON:0004912!2.00e-08!7;UBERON:0004119!2.06e-08!169;UBERON:0000925!2.06e-08!169;UBERON:0006595!2.06e-08!169;UBERON:0007023!4.64e-08!115;UBERON:0001007!3.05e-07!155;UBERON:0001555!3.05e-07!155;UBERON:0007026!3.05e-07!155;UBERON:0000160!4.99e-07!27;UBERON:0005409!8.00e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.57e-31;17!UBERON:0005409;9.09e-29;22!UBERON:0004921;2.01e-20;33!UBERON:0002108;1.99e-19;4!UBERON:0000059;3.93e-13;11!UBERON:0001155;1.09e-10;9!UBERON:0002114;6.93e-09;2!UBERON:0002294;5.00e-08;7!UBERON:0001173;5.00e-08;7!UBERON:0004913;2.36e-07;1!UBERON:0003703;2.36e-07;1!UBERON:0001174;2.36e-07;1!UBERON:0004914;2.36e-07;1!UBERON:0001555;2.54e-07;54!UBERON:0001154;4.13e-07;1!UBERON:0001153;4.13e-07;1!UBERON:0009854;4.13e-07;1!UBERON:0000997;4.51e-07;1!UBERON:0005056;4.51e-07;1!UBERON:0004176;4.51e-07;1!UBERON:0002394;9.26e-07;4!UBERON:0003928;9.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.37e-31,17;UBERON:0005409,3.30e-25,25;UBERON:0002108,2.00e-19,4;UBERON:0000059,3.84e-13,11;UBERON:0001155,1.09e-10,9;UBERON:0004921,5.92e-09,118;UBERON:0002114,6.94e-09,2;UBERON:0001007,9.73e-08,145;UBERON:0001555,9.73e-08,145;UBERON:0007026,9.73e-08,145;UBERON:0004119,1.12e-07,160;UBERON:0000925,1.12e-07,160;UBERON:0006595,1.12e-07,160;UBERON:0004913,2.36e-07,1;UBERON:0003703,2.36e-07,1;UBERON:0001174,2.36e-07,1;UBERON:0004914,2.36e-07,1;UBERON:0001154,4.25e-07,1;UBERON:0001153,4.25e-07,1;UBERON:0001045,4.25e-07,1;UBERON:0000997,4.51e-07,1;UBERON:0005056,4.51e-07,1;UBERON:0000996,6.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0,0.83593247695339,0.32592226663359,0.946895611469467,0,0.668462741311041,0.589211814949674,0,0.270803863765016,0.896639238079726,0.390178042679635,0.493313713811028,0.552700035571697,1.15921234294021,0.14828656316206,1.60524496853828,1.04535523804977,0.453237370790265,0.383220493601921,1.03088233644789,0.759059076058509,0.318565414324097,0,0.950452044448374,0.451725357233318,0.511946444617674,1.24930726552346,0,0.821127996921047,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0940864751069,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,7.45966571934099,0,0,0,0,0.988551862620595,3.40140231883657,0,0.690503839458535,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.41827123283581,0.153900517007594,0,0,0,0,0,0,1.06606955203727,1.02193298195737,0,0,0,0,0,0,0,0,0.326465616318295,0,0,16.9194528283346,17.8684280296745,18.9419344929424,0,0,0,0,0,0,0,0.782658475728359,0,0.394584402849391,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,5.78155144744828,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0,0,0,0.195551382734803,0.240476460754601,7.68430781061669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.394028536495991,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0.828478110694391,0.496166021811951,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.07220795687463,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.917142992608395,0,0,0,0,0.376051641746286,0,0,0,0,24.3962542258125,0,0,0,0,0.546974809018219,0,0.496211178389294,0,2.6830109804315,0,0,0,0,0.266107110487916,0,0,0,0,0,0.111231401892069,0.941917114206168,0,0.840816489941367,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.9164274741762,0,0,0,0.98150233615243,12.9233000481206,0,0,0,0,0,0,0,0,0,1.05673990496671,35.5772868877625,31.0354575915619,0,1.47088993052343,0,0,0,0,0,0,0,0,1.07132363163395,0.352894871715692,0,10.9550458236978,0,0,0,0,0,15.3417783749466,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,1.27940389140589,0.952257725854961,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.202117188958219,0,0,0.26940821205835,2.36683277795832,0.332660356546013,0.325613074443898,0,0,0,0,0,0,1.99727032255654,0,0 | |||
|short_description=p1@GSDMB | |||
}} |
Revision as of 15:03, 20 January 2014
Short description: | p1@GSDMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GSDMB_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000520542_5end |
EntrezGene: | GSDMB |
HGNC: | 23690 |
UniProt: | B4DKK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.37e-31 | 17 |
gastrointestinal system | 3.30e-25 | 25 |
small intestine | 2.00e-19 | 4 |
large intestine | 3.84e-13 | 11 |
colon | 1.09e-10 | 9 |
subdivision of digestive tract | 5.92e-09 | 118 |
duodenum | 6.94e-09 | 2 |
digestive system | 9.73e-08 | 145 |
digestive tract | 9.73e-08 | 145 |
primitive gut | 9.73e-08 | 145 |
endoderm-derived structure | 1.12e-07 | 160 |
endoderm | 1.12e-07 | 160 |
presumptive endoderm | 1.12e-07 | 160 |
hepatopancreatic ampulla | 2.36e-07 | 1 |
extrahepatic bile duct | 2.36e-07 | 1 |
common bile duct | 2.36e-07 | 1 |
duodenal papilla | 2.36e-07 | 1 |
vermiform appendix | 4.25e-07 | 1 |
caecum | 4.25e-07 | 1 |
midgut | 4.25e-07 | 1 |
mammalian vulva | 4.51e-07 | 1 |
external female genitalia | 4.51e-07 | 1 |
vagina | 6.38e-07 | 1 |