FFCP PHASE1:Hg19::chr17:74547256..74547265,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-88bp_to_uc002jrv.1_5end | |||
|description=CAGE_peak_21_at_CYGB_5end | |||
|id=chr17:74547256..74547265,- | |||
|ontology_enrichment_celltype=CL:0000223!9.27e-09!59;CL:0002368!5.44e-08!13;CL:0002076!5.79e-08!43;CL:0002159!3.25e-07!13;CL:0002166!6.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.29e-19;12!CL:0002368;8.57e-18;13!CL:0000317;6.43e-14;2!CL:1000448;6.43e-14;2!CL:0002308;6.43e-14;2!CL:0002140;6.43e-14;2!CL:0002202;5.51e-12;9!CL:0002632;5.51e-12;9!CL:0002328;1.41e-09;3!CL:0000307;1.41e-09;3!CL:0000244;1.69e-07;4!CL:0000731;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.29e-19,12;CL:0002368,9.61e-18,13;CL:0000223,1.98e-15,58;CL:0000317,6.43e-14,2;CL:1000448,6.43e-14,2;CL:0002308,6.43e-14,2;CL:0002140,6.43e-14,2;CL:0002202,6.51e-12,9;CL:0002632,6.51e-12,9;CL:0000068,1.41e-09,3;CL:0000069,1.41e-09,3;CL:0000307,1.41e-09,3;CL:0000377,1.41e-09,3;CL:0002328,1.81e-09,3;CL:0000244,1.49e-07,4;CL:0000731,1.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.99e-21;11!UBERON:0009497;8.57e-18;13!CL:0000223;1.82e-12;58!CL:0000377;1.41e-09;3!UBERON:0001041;4.22e-08;30!UBERON:0003104;1.04e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!7.64e-09!4;UBERON:0001704!7.64e-09!4;UBERON:0004119!9.68e-07!169;UBERON:0000925!9.68e-07!169;UBERON:0006595!9.68e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;6.43e-14;2!UBERON:0007771;6.43e-14;2!UBERON:0003297;6.43e-14;2!UBERON:0001821;6.43e-14;2!UBERON:0003487;6.43e-14;2!UBERON:0001820;6.43e-14;2!UBERON:0002365;1.39e-12;31!UBERON:0002330;1.39e-12;31!UBERON:0002107;2.07e-12;19!UBERON:0006925;2.07e-12;19!UBERON:0002423;1.35e-09;25!UBERON:0004815;1.41e-09;3!UBERON:0002031;1.41e-09;3!UBERON:0007196;1.44e-07;15!UBERON:0001558;1.44e-07;15!UBERON:0002368;6.29e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,6.43e-14,2;UBERON:0007771,6.43e-14,2;UBERON:0003297,6.43e-14,2;UBERON:0001821,6.43e-14,2;UBERON:0003487,6.43e-14,2;UBERON:0001820,6.43e-14,2;UBERON:0005089,6.43e-14,2;UBERON:0005088,6.43e-14,2;UBERON:0002365,2.88e-13,31;UBERON:0002330,2.88e-13,31;UBERON:0002107,2.07e-12,19;UBERON:0006925,2.07e-12,19;UBERON:0008836,2.07e-12,19;UBERON:0008835,8.20e-11,22;UBERON:0003894,8.20e-11,22;UBERON:0009854,2.26e-10,23;UBERON:0007499,1.35e-09,25;UBERON:0009497,1.35e-09,25;UBERON:0000015,1.35e-09,25;UBERON:0002423,1.35e-09,25;UBERON:0006235,1.35e-09,25;UBERON:0004161,1.35e-09,25;UBERON:0004815,1.81e-09,3;UBERON:0002031,1.81e-09,3;UBERON:0009856,2.99e-09,26;UBERON:0005911,9.09e-08,82;UBERON:0007196,1.59e-07,15;UBERON:0001558,1.59e-07,15;UBERON:0004119,1.63e-07,160;UBERON:0000925,1.63e-07,160;UBERON:0006595,1.63e-07,160;UBERON:0001041,2.56e-07,87;UBERON:0002530,3.68e-07,59;UBERON:0002368,4.98e-07,35 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,2.29706215198469,0.650060246036521,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0.330569830721956,0,1.40373983744043,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.899362287916574,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,0,0.0941438007767792,1.72202149068492,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.269272933229316,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,1.15382201733633,1.81989568406299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0.158013611732727,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.743990036333503,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p21@CYGB | |||
}} |
Revision as of 17:29, 20 January 2014
Short description: | p21@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CYGB_5end |
Coexpression cluster: | NA |
Association with transcript: | -88bp_to_uc002jrv.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.29e-19 | 12 |
respiratory epithelial cell | 9.61e-18 | 13 |
endodermal cell | 1.98e-15 | 58 |
sebum secreting cell | 6.43e-14 | 2 |
epithelial cell of sweat gland | 6.43e-14 | 2 |
epithelial cell of skin gland | 6.43e-14 | 2 |
acinar cell of sebaceous gland | 6.43e-14 | 2 |
epithelial cell of tracheobronchial tree | 6.51e-12 | 9 |
epithelial cell of lower respiratory tract | 6.51e-12 | 9 |
duct epithelial cell | 1.41e-09 | 3 |
branched duct epithelial cell | 1.41e-09 | 3 |
tracheal epithelial cell | 1.41e-09 | 3 |
tracheoblast | 1.41e-09 | 3 |
bronchial epithelial cell | 1.81e-09 | 3 |
transitional epithelial cell | 1.49e-07 | 4 |
urothelial cell | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin gland | 6.43e-14 | 2 |
epidermis gland | 6.43e-14 | 2 |
gland of integumental system | 6.43e-14 | 2 |
sebaceous gland | 6.43e-14 | 2 |
skin sebaceous gland | 6.43e-14 | 2 |
sweat gland | 6.43e-14 | 2 |
sweat gland placode | 6.43e-14 | 2 |
sebaceous gland placode | 6.43e-14 | 2 |
exocrine gland | 2.88e-13 | 31 |
exocrine system | 2.88e-13 | 31 |
liver | 2.07e-12 | 19 |
digestive gland | 2.07e-12 | 19 |
liver bud | 2.07e-12 | 19 |
hepatic diverticulum | 8.20e-11 | 22 |
liver primordium | 8.20e-11 | 22 |
digestive tract diverticulum | 2.26e-10 | 23 |
epithelial sac | 1.35e-09 | 25 |
epithelium of foregut-midgut junction | 1.35e-09 | 25 |
anatomical boundary | 1.35e-09 | 25 |
hepatobiliary system | 1.35e-09 | 25 |
foregut-midgut junction | 1.35e-09 | 25 |
septum transversum | 1.35e-09 | 25 |
lower respiratory tract epithelium | 1.81e-09 | 3 |
epithelium of bronchus | 1.81e-09 | 3 |
sac | 2.99e-09 | 26 |
endo-epithelium | 9.09e-08 | 82 |
tracheobronchial tree | 1.59e-07 | 15 |
lower respiratory tract | 1.59e-07 | 15 |
endoderm-derived structure | 1.63e-07 | 160 |
endoderm | 1.63e-07 | 160 |
presumptive endoderm | 1.63e-07 | 160 |
foregut | 2.56e-07 | 87 |
gland | 3.68e-07 | 59 |
endocrine gland | 4.98e-07 | 35 |