FFCP PHASE1:Hg19::chr18:51751132..51751139,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6917 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBB5 | |||
|association_with_transcript=18bp_to_ENST00000256429,ENST00000398398,NM_003927,NM_015832,uc002lfg.1,uc002lfh.1_5end | |||
|description=CAGE_peak_9_at_MBD2_5end | |||
|id=chr18:51751132..51751139,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.76e-14;18!CL:0000789;8.76e-14;18!CL:0002419;8.76e-14;18!CL:0000625;2.04e-10;11!CL:0000084;4.35e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.61e-13,18;CL:0000789,2.61e-13,18;CL:0002420,2.61e-13,18;CL:0002419,2.61e-13,18;CL:0000790,2.61e-13,18;CL:0000625,5.24e-10,11;CL:0000838,8.15e-09,52;CL:0000084,9.01e-09,25;CL:0000827,9.01e-09,25;CL:0000542,1.47e-08,53;CL:0000051,1.47e-08,53;CL:0000623,7.92e-07,3;CL:0000825,7.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.76e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.01e-07!22;UBERON:0002020!1.09e-07!34;UBERON:0003528!1.09e-07!34;UBERON:0005743!1.20e-07!86;UBERON:0002780!1.38e-07!41;UBERON:0001890!1.38e-07!41;UBERON:0006240!1.38e-07!41;UBERON:0002616!1.39e-07!59;UBERON:0001893!1.50e-07!34;UBERON:0001017!1.82e-07!82;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57;UBERON:0002791!3.28e-07!33;UBERON:0000956!3.77e-07!25;UBERON:0000203!3.77e-07!25;UBERON:0001950!4.54e-07!20;UBERON:0003080!4.81e-07!42;UBERON:0001869!5.61e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.89e-07;20!UBERON:0000956;7.28e-07;25!UBERON:0000203;7.28e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.60e-07,20;UBERON:0000956,8.64e-07,25;UBERON:0000203,8.64e-07,25 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.527533956456907,0.495065411840187,0.994192127183747,1.34465029290355,0,0,0.975865597581014,0.492484232307152,0.204000691244253,0,0.286235987131057,0,1.00434111675842,0.764134057479513,1.14940825229924,0.944529375764151,1.57345710739562,1.53531759238885,0.928896739896456,0.919421224478927,0,0,0.154934401160603,0.426507697462265,1.17440175733939,0.553995408531877,0,1.51907609501096,0.223915474239924,0.971680998056939,0.515151135268373,0.145398238779565,0,0.485168122375632,0,0,0,0.863077176966451,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0.918251677112708,0.962787081228281,0.639337125799041,0.329851300186716,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0.65156653411535,0,0,0.316462387440884,0.845021145247767,1.27562579979026,0.628975936525128,0.898629049171961,0.901061357049038,0.964353520182481,1.42506371870624,0.99458338599545,2.37463399894024,0,0,1.77901850772711,0.426730222566507,0.800791974072025,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,0.560508562981536,0,1.37696839079683,3.53709686474248,0.205601498999509,0.501559486172034,2.93330039970231,3.31413464014313,1.94826728407911,0.557052284425868,0.589211814949674,1.55073726208535,0.541607727530031,0.768547918354051,0.520237390239513,0.328875809207352,0,0.579606171470105,1.4828656316206,2.40786745280742,1.04535523804977,0.453237370790265,1.14966148080576,0.34362744548263,2.27717722817553,0,1.30216690771284,0,1.05402583354441,1.02389288923535,1.24930726552346,1.89421801635213,0.821127996921047,1.00803371612366,1.60464117470104,2.17236605824198,0,0.670700859703636,0,0.361439152384566,0.50133791063589,1.15877215168659,0,0.486634870302636,0.756278537312543,0.665188192387692,0.43917392846563,0.196468613246569,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0.860234595106124,0,0,0.838998872419812,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.673588117878509,0.337834441449967,0,0,0.366403487860815,2.63560834872127,0,0,0.496971951695318,0.379891534993739,1.05927344650575,0.860509862246441,0.354668382198357,0,0,0.24666754841716,1.24484414159907,0.134710672069688,0,0.454072282934794,1.15235184896,0.234321431833797,0.312160076830321,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0.368502951935304,0.309977343527296,0,0.741800787835671,0.910161361938026,0.718618141816238,0,0.250237039743928,0.277064115484183,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,0.717558542755448,0.640672166455702,0.847727604638247,0.900273288253207,0.412210116953756,1.8034837803194,0,1.35021065793013,0.292311015483596,0.504867548488229,0.920498986422993,0.161646056818812,0.355009592516614,0.806016785821122,0.169560592310488,0.386521706326594,0,0.573609190778008,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0,0,1.92972281457866,0,1.39310378409594,0,0,0,0.482022059766964,0,0,0.237270619111097,0.269662616320329,0.392442930250692,0,0.738155454624648,0,0,0,0,0.982827216677626,1.77236972004421,0.882926198829301,0,0,0.109750285408626,0,0,0.370353780634118,0,0,0,0.927443239800615,0.587043471179108,0,0.462985512576611,0.570762456703795,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0.264145302039678,0.414656231081544,0.576479813667846,0.25248486685276,0.126995788584338,0.763976851116555,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0.771622122786426,0,0,0.142977993658148,0,1.64648067356154,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,2.29723871668228,1.42636905040718,0.579125226670317,0.821905290201534,0.358121926479791,0.336255431980582,1.57624608161542,1.2937654491571,1.54011643535698,1.52456774533478,1.30139853857622,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0.414415513436035,0.613457458595699,0,0,1.24782516918484,1.07057393278297,0.473107245101804,0,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0,0.343143423810856,1.86091223510599,0.215714200818617,1.28073069364133,0,0,0.604780586659361,1.24053903909388,1.38115775959256,1.12264037773229,1.02511319404561,0,0,0,0.462629081407967,0.355123450626254,0.246381468041427,0.519254429183621,0.464841513839837,0.120859449591622,0.40101294060657,0.276242966807689,0.34444334449382,0,0.393373244878272,0,0.462092022626489,0,0,0.422206515571503,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0.671624264166535,0.219259876645935,0,0.512900250232778,0,0.976135183992909,0.309123034943167,0.366277859273374,0.1650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| |||
|short_description=p9@MBD2 | |||
}} |
Revision as of 19:24, 20 January 2014
Short description: | p9@MBD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MBD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000256429, ENST00000398398, NM_003927, NM_015832, uc002lfg.1, uc002lfh.1_5end |
EntrezGene: | MBD2 |
HGNC: | 6917 |
UniProt: | Q9UBB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.61e-13 | 18 |
alpha-beta T cell | 2.61e-13 | 18 |
immature T cell | 2.61e-13 | 18 |
mature T cell | 2.61e-13 | 18 |
immature alpha-beta T cell | 2.61e-13 | 18 |
CD8-positive, alpha-beta T cell | 5.24e-10 | 11 |
lymphoid lineage restricted progenitor cell | 8.15e-09 | 52 |
T cell | 9.01e-09 | 25 |
pro-T cell | 9.01e-09 | 25 |
lymphocyte | 1.47e-08 | 53 |
common lymphoid progenitor | 1.47e-08 | 53 |
natural killer cell | 7.92e-07 | 3 |
pro-NK cell | 7.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.60e-07 | 20 |
cerebral cortex | 8.64e-07 | 25 |
pallium | 8.64e-07 | 25 |