FFCP PHASE1:Hg19::chr18:61442767..61442774,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13902 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZC0 | |||
|association_with_transcript=112bp_to_ENST00000540675_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_9_at_SERPINB7_5end | |||
|id=chr18:61442767..61442774,+ | |||
|ontology_enrichment_celltype=CL:0002620!9.31e-26!23;CL:0000057!1.33e-21!75;CL:0002334!1.56e-17!12;CL:0000055!7.24e-15!180;CL:0002579!5.09e-08!3;CL:0000188!5.62e-08!9;CL:0002580!6.13e-08!3;CL:0000594!5.29e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.01e-31;23!CL:0002617;1.11e-13;2!CL:0000135;5.60e-10;3!CL:0000388;5.60e-10;3!CL:0002581;4.81e-08;1!CL:0000511;1.11e-07;1!CL:0002625;1.11e-07;1!CL:0000216;1.11e-07;1!CL:0000057;2.77e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.75e-32,23;CL:0000057,3.15e-21,76;CL:0002617,5.81e-14,2;CL:0000135,6.27e-10,3;CL:0000388,6.27e-10,3;CL:0002581,4.07e-08,1;CL:0000511,7.45e-08,1;CL:0002625,7.45e-08,1;CL:0000216,7.45e-08,1;CL:0000136,6.27e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.06e-11!5;DOID:450!2.06e-11!5;DOID:66!2.06e-11!5;DOID:423!2.06e-11!5;DOID:0080000!2.06e-11!5;DOID:11722!2.06e-11!5 | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.70e-10;3!DOID:127;9.70e-10;3!DOID:3371;1.11e-07;1!DOID:4549;1.11e-07;1!DOID:5861;1.11e-07;1!DOID:6496;1.11e-07;1!DOID:0060072;1.64e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.21e-09,3;DOID:127,1.21e-09,3;DOID:3371,7.97e-08,1;DOID:4549,7.97e-08,1;DOID:5861,7.97e-08,1;DOID:6496,7.97e-08,1;DOID:0060072,1.93e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.56e-14!40;UBERON:0002199!7.28e-14!45;UBERON:0002416!7.28e-14!45;UBERON:0003102!1.57e-07!95;UBERON:0003688!9.65e-07!6;UBERON:0002358!9.65e-07!6;UBERON:0003684!9.65e-07!6;UBERON:0001178!9.65e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.47e-15;41!UBERON:0002199;1.34e-11;46!UBERON:0002416;1.34e-11;46!UBERON:0003102;3.13e-10;50!UBERON:0007846;5.60e-10;3!UBERON:0000043;5.60e-10;3!UBERON:0007845;5.60e-10;3!UBERON:0001136;1.11e-07;1!UBERON:0001343;1.11e-07;1!UBERON:0004910;1.11e-07;1!UBERON:0004813;1.11e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.99e-20,41;UBERON:0002199,8.32e-18,46;UBERON:0002416,8.32e-18,46;UBERON:0007846,6.27e-10,3;UBERON:0000043,6.27e-10,3;UBERON:0007845,6.27e-10,3;UBERON:0003102,2.07e-08,99;UBERON:0004871,3.57e-08,8;UBERON:0001136,7.45e-08,1;UBERON:0001343,7.45e-08,1;UBERON:0004910,7.45e-08,1;UBERON:0005154,7.45e-08,1;UBERON:0005295,7.45e-08,1;UBERON:0004813,7.45e-08,1;UBERON:0005297,7.45e-08,1;UBERON:0005294,7.45e-08,1;UBERON:0010141,7.45e-08,1;UBERON:0005891,7.45e-08,1 | |||
|phase1_expression=1.63510541343501,1.49870366723688,1.26858963686374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351170855109,0.427114777637135,1.27159140695737,0.300091096084402,0.103052529238439,2.83404594050192,2.23340227597908,2.02531598689519,1.85130309806277,0.252433774244115,1.56484827691909,0,1.06502877754984,1.20902517873168,1.69560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.630809660135739,1.28855556491985,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0,4.21783273291921,0.920771839728375,0.280660094433074,3.45975702990393,0.511707249066704,0.482561763430822,2.96836132889982,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0,0,0.275673144969061,0.429680979473094,0.290033387828457,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83354593529453,0.296964680832639,12.2864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0.343972064943233,0,0,0,0,1.588610280447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,3.5924609612035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34795516350076,0,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.448527450322454,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p9@SERPINB7 | |||
}} |
Revision as of 19:42, 20 January 2014
Short description: | p9@SERPINB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SERPINB7_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 112bp_to_ENST00000540675_5end |
EntrezGene: | SERPINB7 |
HGNC: | 13902 |
UniProt: | F5GZC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.75e-32 | 23 |
fibroblast | 3.15e-21 | 76 |
adipocyte of breast | 5.81e-14 | 2 |
fibrocyte | 6.27e-10 | 3 |
tendon cell | 6.27e-10 | 3 |
perirenal preadipocyte | 4.07e-08 | 1 |
androgen binding protein secreting cell | 7.45e-08 | 1 |
seminiferous tubule epithelial cell | 7.45e-08 | 1 |
Sertoli cell | 7.45e-08 | 1 |
fat cell | 6.27e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.99e-20 | 41 |
integument | 8.32e-18 | 46 |
integumental system | 8.32e-18 | 46 |
dense regular connective tissue | 6.27e-10 | 3 |
tendon | 6.27e-10 | 3 |
regular connective tissue | 6.27e-10 | 3 |
surface structure | 2.07e-08 | 99 |
somatic layer of lateral plate mesoderm | 3.57e-08 | 8 |
mesothelium | 7.45e-08 | 1 |
seminiferous tubule of testis | 7.45e-08 | 1 |
epithelium of male gonad | 7.45e-08 | 1 |
epithelial cord | 7.45e-08 | 1 |
sex cord | 7.45e-08 | 1 |
seminiferous tubule epithelium | 7.45e-08 | 1 |
testis sex cord | 7.45e-08 | 1 |
genital ridge | 7.45e-08 | 1 |
primitive sex cord of indifferent gonad | 7.45e-08 | 1 |
coelomic epithelium | 7.45e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.21e-09 | 3 |
leiomyoma | 1.21e-09 | 3 |
chondrosarcoma | 7.97e-08 | 1 |
extraosseous chondrosarcoma | 7.97e-08 | 1 |
myxoid chondrosarcoma | 7.97e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 7.97e-08 | 1 |
benign neoplasm | 1.93e-07 | 4 |