FFCP PHASE1:Hg19::chr19:49122846..49122911,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56848 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18859 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=55bp_to_uc002pjs.2_5end | |||
|description=CAGE_peak_3_at_SPHK2_5end | |||
|id=chr19:49122846..49122911,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.83e-12!248;CL:0000220!2.03e-12!246;CL:0000066!1.06e-10!254;CL:0000222!2.19e-09!119;CL:0000076!2.09e-07!62;CL:0000055!2.13e-07!180;CL:0000213!2.24e-07!57;CL:0000215!2.24e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.33e-11,250;CL:0000222,2.93e-10,121;CL:0000066,1.71e-09,253;CL:0000213,1.83e-08,58;CL:0000215,1.83e-08,58;CL:0000076,1.62e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!4.32e-14!286;UBERON:0004111!1.54e-12!241;UBERON:0000119!3.11e-12!312;UBERON:0000483!6.17e-12!309;UBERON:0000025!7.85e-11!194;UBERON:0000055!4.47e-10!69;UBERON:0002049!1.90e-08!79;UBERON:0007798!1.90e-08!79;UBERON:0004872!1.91e-08!84;UBERON:0001981!2.40e-08!60;UBERON:0007500!2.40e-08!60;UBERON:0004537!2.40e-08!60;UBERON:0006965!2.40e-08!60;UBERON:0004573!3.04e-08!33;UBERON:0004571!3.04e-08!33;UBERON:0001637!1.10e-07!42;UBERON:0003509!1.10e-07!42;UBERON:0004572!1.10e-07!42;UBERON:0000481!3.81e-07!347;UBERON:0003914!4.11e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.88e-08;33!UBERON:0004571;9.88e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.17e-12,309;UBERON:0004111,3.87e-12,240;UBERON:0000483,4.46e-12,306;UBERON:0000055,3.09e-11,68;UBERON:0000025,8.17e-11,192;UBERON:0004872,1.66e-09,83;UBERON:0007500,2.33e-09,59;UBERON:0001981,2.33e-09,59;UBERON:0004537,2.33e-09,59;UBERON:0006965,2.33e-09,59;UBERON:0004573,7.98e-09,33;UBERON:0004571,7.98e-09,33;UBERON:0002049,1.25e-08,78;UBERON:0007798,1.25e-08,78;UBERON:0001637,3.15e-08,42;UBERON:0003509,3.15e-08,42;UBERON:0004572,3.15e-08,42;UBERON:0003914,3.13e-07,117 | |||
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| |||
|short_description=p3@SPHK2 | |||
}} |
Revision as of 00:19, 21 January 2014
Short description: | p3@SPHK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPHK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_uc002pjs.2_5end |
EntrezGene: | SPHK2 |
HGNC: | 18859 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.33e-11 | 250 |
mesodermal cell | 2.93e-10 | 121 |
epithelial cell | 1.71e-09 | 253 |
lining cell | 1.83e-08 | 58 |
barrier cell | 1.83e-08 | 58 |
squamous epithelial cell | 1.62e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cell layer | 2.17e-12 | 309 |
anatomical conduit | 3.87e-12 | 240 |
epithelium | 4.46e-12 | 306 |
vessel | 3.09e-11 | 68 |
tube | 8.17e-11 | 192 |
splanchnic layer of lateral plate mesoderm | 1.66e-09 | 83 |
epithelial tube open at both ends | 2.33e-09 | 59 |
blood vessel | 2.33e-09 | 59 |
blood vasculature | 2.33e-09 | 59 |
vascular cord | 2.33e-09 | 59 |
systemic artery | 7.98e-09 | 33 |
systemic arterial system | 7.98e-09 | 33 |
vasculature | 1.25e-08 | 78 |
vascular system | 1.25e-08 | 78 |
artery | 3.15e-08 | 42 |
arterial blood vessel | 3.15e-08 | 42 |
arterial system | 3.15e-08 | 42 |
epithelial tube | 3.13e-07 | 117 |