FFCP PHASE1:Hg19::chr19:55658217..55658257,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11948 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=59bp_to_uc002qiz.3,uc002qja.3_5end | |||
|description=CAGE_peak_3_at_TNNT1_5end | |||
|id=chr19:55658217..55658257,- | |||
|ontology_enrichment_celltype=CL:0000066!6.03e-30!254;CL:0000082!7.02e-09!19;CL:0000076!2.80e-08!62;CL:0000223!1.98e-07!59;CL:0000039!2.09e-07!7;CL:0000586!2.09e-07!7;CL:0002076!4.05e-07!43;CL:0000077!8.96e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.73e-10;7!CL:0000586;2.73e-10;7!CL:0002322;3.81e-10;5!CL:0000082;2.05e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.23e-15,253;CL:0000039,2.81e-10,7;CL:0000586,2.81e-10,7;CL:0002322,4.07e-10,5;CL:0000082,2.37e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.11e-59!235;DOID:14566!5.85e-58!239;DOID:0050687!2.99e-45!143;DOID:305!3.56e-40!106;DOID:0050686!3.05e-28!137;DOID:1324!1.26e-09!15;DOID:0050615!1.03e-08!16;DOID:1749!1.71e-08!14;DOID:7!2.17e-08!39;DOID:299!9.40e-08!25;DOID:8692!1.09e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.85e-09;15!DOID:0050687;5.38e-09;143!DOID:0050615;1.00e-08;16!DOID:1115;1.57e-08;20!DOID:1325;4.63e-08;7!DOID:3904;4.63e-08;7!DOID:3095;6.29e-08;22!DOID:2994;6.29e-08;22!DOID:8692;6.31e-08;31!DOID:305;6.37e-08;106!DOID:170;2.15e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.28e-39,235;DOID:14566,5.10e-38,239;DOID:0050687,1.02e-32,143;DOID:305,9.96e-26,106;DOID:0050686,5.65e-24,137;DOID:1324,1.77e-09,15;DOID:0050615,9.61e-09,16;DOID:1115,1.24e-08,20;DOID:8692,4.18e-08,31;DOID:1325,4.97e-08,7;DOID:3904,4.97e-08,7;DOID:3095,6.74e-08,22;DOID:2994,6.74e-08,22;DOID:170,1.98e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004802!7.02e-09!19;UBERON:0000115!7.02e-09!19;UBERON:0005153!5.02e-08!37;UBERON:0004807!9.86e-08!28;UBERON:0005157!2.36e-07!51;UBERON:0002048!6.07e-07!22;UBERON:0000117!6.07e-07!22;UBERON:0000171!6.07e-07!22;UBERON:0000170!6.07e-07!22;UBERON:0005597!6.07e-07!22;UBERON:0000118!6.07e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;2.05e-08;19!UBERON:0000115;2.05e-08;19!UBERON:0002048;6.28e-07;22!UBERON:0004807;6.28e-07;22!UBERON:0000117;6.28e-07;22!UBERON:0000171;6.28e-07;22!UBERON:0000170;6.28e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,2.37e-08,19;UBERON:0000115,2.37e-08,19;UBERON:0005153,2.49e-07,37;UBERON:0002048,7.07e-07,22;UBERON:0000117,7.07e-07,22;UBERON:0000171,7.07e-07,22;UBERON:0000170,7.07e-07,22;UBERON:0005597,7.07e-07,22;UBERON:0000118,7.07e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.84636884759917,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.6024118375565,1.10926203050036,0.154934401160603,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.80823028409406,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,6.22065901260936,7.81925633096763,9.52790331530051,3.10983165046111,4.54177531576131,4.74470566798579,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.539325232640658,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,1.3068766413512,0.925884451585296,0.325808305310325,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,1.61205340865127,0.290633938513962,1.53353071666084,0,0,0,0,0,0.063497894292169,0.763976851116555,0,1.71072446022705,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,2.42502057157008,1.66435439510497,5.44302527993425,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,1.32945394550784,0.200506470303285,0.828728900423067,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0.356128142586949,0.165284915360978,0.192190067365106,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.673554789078584,1.34060455107157,0,0,0.43050537267123,0,1.33029046061003,0,0,0,0,0,0,0.648473311192717,0,0,5.02073134299124,2.88743956579008,0.245040215981032,0,0,0,0.478278818186467,0,0.191505370132367,0.211673582723883,0.649243880549111,1.96558024679421,2.05411211129873,0.156679895773023,7.51903431270201,2.03150133361924,0,0,1.27753871307098,0.687010689511529,1.53620382154229,1.3420566473545,1.16794399198336,2.54004524022652,0,3.69262196843137,0,1.6653598399891,0,0,0,2.30584991324076,0.222886768554957,1.42068073403207,1.67121139316383,2.07875276582847,2.45728561679386,0,0,1.00177834520615,0.494411622680279,1.47787785689595,0,0,0,0.409074730008619,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0.7812832832557,2.0990399999087,0,0.455173793141999,1.5255219017566,1.18193840883968,1.03423011972439,0.583209226766509,0,0,0,0,0,0,0,0.32681539055697,1.95193241990045,0,0.683652335082007,6.9169171316418,3.14151755434202,0.217294743844016,0,0,0,0,1.56980256395025,0.498635045700469,2.03036094555463,2.54881294613061,2.51732380463764,0.189753732724185,0,1.26598838716816,0.326465616318295,2.54435528581093,0,0,0,0,0,0,0,0,0,0,0,2.73930466504926,1.45668227720456,0,0,0.30607276163049,0.063186579628488,1.35291077473043,0.622129148383483,1.32930774541437,0,0.941798755221676,0,7.39984819677461,3.18951747930219,0.867798691675654,1.56787835863004,2.17648016451006,0,2.40780445460263,0.290268993867255,0.584714536689484,0.164230914106418,0.193978032976839,18.7102988585981,0,0.685209623233754,0.19871461170299,0.0633107959558787,2.34661659281764,0.320635281006135,0,0.799238438328521,0.864542502924636,2.06165873098648,0.514784993585894,0,0.869767748958028,1.17847017308398,3.80531777006119,3.66109962093166,3.46793939963494,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0,4.65983798109815,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,10.6097077986913,4.81388028090318,4.15440338029185,0,0,0.485996453264197,2.68347750079413,0,0.104909176269996,1.37280437475228,0.179287339332845,0.959575986597226,0,0,1.5256112259285,0,0,0,0,0,0,2.49286601344276,0,0,0,0,0.855434189421647,2.81926008926669,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0.570930667089935,0.470531639396343,6.08835377548946,5.79684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.601030435988874,0,0.406870733204662,0,0.644463342254931,0,0,1.20008329398946,0.343395705182793,0,0,3.08191728651685,4.50327341887344,0.260994291965212,0.680117776536817,0.463044948647668,2.69210374957114,0,3.08801447160972,2.19284049578707,1.76689145945881,3.47245268887647,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0.327609848846413,1.47463745252232,0.422624246717254,0,0,0,3.40509572140102,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,5.027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| |||
|short_description=p3@TNNT1 | |||
}} |
Revision as of 01:08, 21 January 2014
Short description: | p3@TNNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_uc002qiz.3, uc002qja.3_5end |
EntrezGene: | TNNT1 |
HGNC: | 11948 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.23e-15 | 253 |
germ line cell | 2.81e-10 | 7 |
germ cell | 2.81e-10 | 7 |
embryonic stem cell | 4.07e-10 | 5 |
epithelial cell of lung | 2.37e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 2.37e-08 | 19 |
lung epithelium | 2.37e-08 | 19 |
epithelial bud | 2.49e-07 | 37 |
lung | 7.07e-07 | 22 |
respiratory tube | 7.07e-07 | 22 |
respiration organ | 7.07e-07 | 22 |
pair of lungs | 7.07e-07 | 22 |
lung primordium | 7.07e-07 | 22 |
lung bud | 7.07e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.28e-39 | 235 |
disease of cellular proliferation | 5.10e-38 | 239 |
cell type cancer | 1.02e-32 | 143 |
carcinoma | 9.96e-26 | 106 |
organ system cancer | 5.65e-24 | 137 |
lung cancer | 1.77e-09 | 15 |
respiratory system cancer | 9.61e-09 | 16 |
sarcoma | 1.24e-08 | 20 |
myeloid leukemia | 4.18e-08 | 31 |
bronchus cancer | 4.97e-08 | 7 |
bronchogenic carcinoma | 4.97e-08 | 7 |
germ cell and embryonal cancer | 6.74e-08 | 22 |
germ cell cancer | 6.74e-08 | 22 |
endocrine gland cancer | 1.98e-07 | 6 |