FFCP PHASE1:Hg19::chr2:35680607..35680613,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1408 | |||
|description=CAGE_peak_at_chr2:35680607..35680613,- | |||
|id=chr2:35680607..35680613,- | |||
|ontology_enrichment_celltype=CL:0000064!1.85e-36!3;CL:0005012!1.85e-36!3;CL:0000067!1.85e-36!3;CL:0002304!1.85e-36!3;CL:0000075!4.58e-27!27;CL:0002322!1.59e-21!5;CL:0000710!6.86e-21!20;CL:0000147!1.04e-13!14;CL:0000342!1.61e-13!1;CL:0002565!1.61e-13!1;CL:0000306!8.67e-13!4;CL:0002222!8.67e-13!4;CL:0002224!8.67e-13!4;CL:0002077!1.53e-12!33;CL:0000148!4.46e-11!10;CL:0000541!4.46e-11!10;CL:0000325!1.58e-10!39;CL:0000066!1.86e-08!254;CL:0002253!3.70e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.51e-53;3!CL:0000067;2.51e-53;3!CL:0005012;2.51e-53;3!CL:0002304;2.51e-53;3!CL:0000342;8.10e-41;1!CL:0002565;8.10e-41;1!CL:0000075;5.30e-14;27!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4!CL:0000710;5.81e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.87e-53,3;CL:0000067,2.87e-53,3;CL:0005012,2.87e-53,3;CL:0002304,2.87e-53,3;CL:0000342,6.62e-41,1;CL:0002565,6.62e-41,1;CL:0000075,5.18e-14,27;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4;CL:0000710,5.93e-09,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!3.77e-48!4;UBERON:0007625!1.26e-38!11;UBERON:0000970!6.64e-37!20;UBERON:0001778!1.85e-36!3;UBERON:0001775!1.85e-36!3;UBERON:0002104!4.09e-35!21;UBERON:0002203!2.96e-32!6;UBERON:0001768!2.96e-32!6;UBERON:0000020!5.30e-32!23;UBERON:0001032!1.22e-30!24;UBERON:0004456!1.22e-30!24;UBERON:0001801!2.60e-30!14;UBERON:0000019!6.75e-30!19;UBERON:0000047!6.75e-30!19;UBERON:0004088!6.75e-30!19;UBERON:0003072!6.75e-30!19;UBERON:0003071!6.75e-30!19;UBERON:0004128!6.75e-30!19;UBERON:0001456!5.27e-27!21;UBERON:0005085!2.05e-19!29;UBERON:0002200!9.32e-18!11;UBERON:0006876!9.32e-18!11;UBERON:0002506!1.61e-13!1;UBERON:0001769!1.61e-13!1;UBERON:0010077!8.67e-13!4;UBERON:0005389!8.67e-13!4;UBERON:0000484!8.67e-13!4;UBERON:0002546!8.67e-13!4;UBERON:0000965!8.67e-13!4;UBERON:0001803!8.67e-13!4;UBERON:0003073!8.67e-13!4;UBERON:0005426!8.67e-13!4;UBERON:0001444!1.69e-11!48;UBERON:0003056!9.30e-09!61;UBERON:0000063!6.09e-07!97;UBERON:0000076!7.88e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;5.71e-89;4!UBERON:0002203;9.96e-60;6!UBERON:0001768;9.96e-60;6!UBERON:0002200;9.96e-60;6!UBERON:0007625;9.97e-58;11!UBERON:0001778;2.51e-53;3!UBERON:0001775;2.51e-53;3!UBERON:0001801;1.40e-45;14!UBERON:0002506;8.10e-41;1!UBERON:0001769;8.10e-41;1!UBERON:0000019;7.67e-34;19!UBERON:0000047;7.67e-34;19!UBERON:0004088;7.67e-34;19!UBERON:0010230;7.67e-34;19!UBERON:0006876;4.29e-33;11!UBERON:0000970;3.39e-32;20!UBERON:0002104;1.04e-30;21!UBERON:0001456;1.04e-30;21!UBERON:0000020;4.07e-28;23!UBERON:0001032;5.55e-27;24!UBERON:0004456;5.55e-27;24!UBERON:0010371;5.93e-20;31!UBERON:0002394;3.42e-11;4!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0001444;8.83e-10;48!UBERON:0000033;4.24e-08;50!UBERON:0007811;2.71e-07;52!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,5.72e-89,4;UBERON:0002203,9.96e-60,6;UBERON:0001768,9.96e-60,6;UBERON:0002200,9.96e-60,6;UBERON:0007625,8.62e-58,11;UBERON:0001778,2.87e-53,3;UBERON:0001775,2.87e-53,3;UBERON:0001801,1.25e-45,14;UBERON:0002506,6.62e-41,1;UBERON:0001769,6.62e-41,1;UBERON:0006876,4.29e-33,11;UBERON:0000019,3.13e-32,20;UBERON:0000047,3.13e-32,20;UBERON:0010312,3.13e-32,20;UBERON:0004088,3.13e-32,20;UBERON:0010230,3.13e-32,20;UBERON:0003072,3.13e-32,20;UBERON:0004128,3.13e-32,20;UBERON:0003071,3.13e-32,20;UBERON:0000970,9.67e-31,21;UBERON:0002104,9.67e-31,21;UBERON:0001456,2.19e-29,22;UBERON:0000020,5.19e-27,24;UBERON:0001032,5.19e-27,24;UBERON:0004456,5.19e-27,24;UBERON:0005085,4.17e-21,31;UBERON:0001444,1.22e-13,49;UBERON:0000033,5.06e-12,56;UBERON:0010077,3.10e-11,4;UBERON:0005389,3.10e-11,4;UBERON:0000484,3.10e-11,4;UBERON:0002546,3.10e-11,4;UBERON:0000965,3.10e-11,4;UBERON:0001803,3.10e-11,4;UBERON:0003073,3.10e-11,4;UBERON:0005426,3.10e-11,4;UBERON:0000153,6.33e-11,62;UBERON:0007811,6.33e-11,62;UBERON:0003056,6.33e-11,61;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0002346,5.76e-08,86;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0001048,8.66e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,1.10864698731282,2.10803485663503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91665277507493,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07842021376792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633492505057185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:35680607..35680613,- | |||
}} |
Revision as of 02:33, 21 January 2014
Short description: | p@chr2:35680607..35680613, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:35680607..35680613, - |
Coexpression cluster: | C1408_Iris_Ciliary_Lens_Retinal_Astrocyte_Smooth_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.87e-53 | 3 |
ciliated epithelial cell | 2.87e-53 | 3 |
multi-ciliated epithelial cell | 2.87e-53 | 3 |
non-pigmented ciliary epithelial cell | 2.87e-53 | 3 |
pigment cell (sensu Vertebrata) | 6.62e-41 | 1 |
iris pigment epithelial cell | 6.62e-41 | 1 |
columnar/cuboidal epithelial cell | 5.18e-14 | 27 |
crystallin accumulating cell | 3.10e-11 | 4 |
vertebrate lens cell | 3.10e-11 | 4 |
lens epithelial cell | 3.10e-11 | 4 |
neurecto-epithelial cell | 5.93e-09 | 20 |