FFCP PHASE1:Hg19::chr2:233285879..233285893,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr2:233285879..233285893,- | |||
|id=chr2:233285879..233285893,- | |||
|ontology_enrichment_celltype=CL:0002322!1.85e-25!5;CL:0000039!1.01e-17!7;CL:0000586!1.01e-17!7;CL:0000540!6.37e-08!6;CL:0000031!6.37e-08!6;CL:0000404!6.37e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.15e-71;5!CL:0000039;1.19e-32;7!CL:0000586;1.19e-32;7!CL:0002321;4.95e-24;15!CL:0000540;2.01e-21;6!CL:0000404;2.01e-21;6!CL:0000148;1.54e-13;10!CL:0000147;7.71e-10;14!CL:0000710;4.81e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.15e-71,5;CL:0000039,1.14e-32,7;CL:0000586,1.14e-32,7;CL:0000540,2.08e-21,6;CL:0000031,2.08e-21,6;CL:0000404,2.08e-21,6;CL:0000047,3.12e-16,8;CL:0000148,1.54e-13,10;CL:0000541,1.54e-13,10;CL:0000147,7.71e-10,14;CL:0000133,4.60e-08,59;CL:0000710,4.81e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.43e-23;10!UBERON:0005564;5.43e-23;10!CL:0000031;2.01e-21;6 | |||
|ontology_enrichment_disease=DOID:3095!1.39e-07!22;DOID:2994!1.39e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.98e-16;22!DOID:2994;3.98e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.91e-16,22;DOID:2994,3.91e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!5.24e-11!11;UBERON:0000473!3.02e-10!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.25e-28;8!UBERON:0003135;6.13e-21;11!UBERON:0000922;2.66e-14;49!UBERON:0000991;3.99e-11;21!UBERON:0003101;1.24e-10;22!UBERON:0000079;1.24e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-28,8;UBERON:0003135,5.98e-21,11;UBERON:0000991,3.94e-11,21;UBERON:0009196,3.94e-11,21;UBERON:0009117,3.94e-11,21;UBERON:0005564,3.94e-11,21;UBERON:0004176,1.23e-10,22;UBERON:0003101,1.23e-10,22;UBERON:0000079,1.23e-10,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.0809286147104,25.9758345910111,16.7319277732106,12.024682381783,9.08355063152262,7.66452454059243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.461701551022782,0,0,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,1.92903778158023,2.20063098555574,3.32352270423348,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553258019713743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46327859818478,0,18.4599781832987,10.4214788053569,3.85958578046349,4.011320628678,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p@chr2:233285879..233285893,- | |||
}} |
Revision as of 09:13, 21 January 2014
Short description: | p@chr2:233285879..233285893, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:233285879..233285893, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.15e-71 | 5 |
germ line cell | 1.14e-32 | 7 |
germ cell | 1.14e-32 | 7 |
neuron | 2.08e-21 | 6 |
neuroblast | 2.08e-21 | 6 |
electrically signaling cell | 2.08e-21 | 6 |
neuronal stem cell | 3.12e-16 | 8 |
melanocyte | 1.54e-13 | 10 |
melanoblast | 1.54e-13 | 10 |
pigment cell | 7.71e-10 | 14 |
neurectodermal cell | 4.60e-08 | 59 |
neurecto-epithelial cell | 4.81e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 1.21e-28 | 8 |
male reproductive organ | 5.98e-21 | 11 |
gonad | 3.94e-11 | 21 |
indifferent external genitalia | 3.94e-11 | 21 |
indifferent gonad | 3.94e-11 | 21 |
gonad primordium | 3.94e-11 | 21 |
external genitalia | 1.23e-10 | 22 |
male organism | 1.23e-10 | 22 |
male reproductive system | 1.23e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.91e-16 | 22 |
germ cell cancer | 3.91e-16 | 22 |