Personal tools

FFCP PHASE1:Hg19::chr20:57739225..57739236,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C23|description=CAGE_peak_at_chr20:57739225..57739236,-|id=chr20:57739225..57739236,-|ontology_enrichment_celltype=CL:0000624!7.09e-40!6;CL:0000791!2.54e-28!18;CL:0000789!2.54e-28!18;CL:0002420!2.54e-28!18;CL:0002419!2.54e-28!18;CL:0000790!2.54e-28!18;CL:0000898!5.68e-21!3;CL:0000623!5.01e-20!3;CL:0000825!5.01e-20!3;CL:0000084!5.43e-20!25;CL:0000827!5.43e-20!25;CL:0000838!1.09e-18!52;CL:0000542!2.74e-18!53;CL:0000051!2.74e-18!53;CL:0000815!9.65e-15!2;CL:0000792!9.65e-15!2;CL:0002677!9.65e-15!2;CL:0002087!3.64e-12!119;CL:0000738!7.56e-10!140;CL:0000842!1.71e-09!3;CL:0002031!1.06e-08!124;CL:0000810!5.70e-08!1;CL:0000895!5.70e-08!1;CL:0002436!5.70e-08!1;CL:0002427!5.70e-08!1;CL:0002428!5.70e-08!1;CL:0002429!5.70e-08!1;CL:0002433!5.70e-08!1;CL:0002431!5.70e-08!1;CL:0002432!5.70e-08!1;CL:0000037!2.08e-07!172;CL:0000566!2.08e-07!172;CL:0000224!2.50e-07!4;CL:0000988!8.00e-07!182|ontology_enrichment_celltype_v019=CL:0000624;9.76e-79;6!CL:0000898;1.22e-40;3!CL:0000815;5.06e-28;2!CL:0000792;5.06e-28;2!CL:0002677;5.06e-28;2!CL:0000791;3.30e-26;18!CL:0000789;3.30e-26;18!CL:0002419;3.30e-26;18!CL:0000084;8.09e-19;25!CL:0000895;1.84e-14;1!CL:0000542;3.60e-07;53|ontology_enrichment_celltype_v019_2=CL:0000624,9.13e-79,6;CL:0000898,1.49e-40,3;CL:0000815,5.41e-28,2;CL:0000792,5.41e-28,2;CL:0002677,5.41e-28,2;CL:0000791,3.23e-26,18;CL:0000789,3.23e-26,18;CL:0002420,3.23e-26,18;CL:0002419,3.23e-26,18;CL:0000790,3.23e-26,18;CL:0000084,7.96e-19,25;CL:0000827,7.96e-19,25;CL:0000810,2.11e-14,1;CL:0000895,2.11e-14,1;CL:0002436,2.11e-14,1;CL:0002427,2.11e-14,1;CL:0002428,2.11e-14,1;CL:0002429,2.11e-14,1;CL:0002433,2.11e-14,1;CL:0002431,2.11e-14,1;CL:0002432,2.11e-14,1;CL:0000838,6.28e-12,52;CL:0000542,1.08e-11,53;CL:0000051,1.08e-11,53;CL:0000893,7.52e-08,2;CL:0002489,7.52e-08,2;CL:0000809,7.52e-08,2;CL:0000808,7.52e-08,2;CL:0000894,7.52e-08,2;CL:0000806,7.52e-08,2;CL:0000807,7.52e-08,2;CL:0000805,7.52e-08,2;CL:0002425,7.52e-08,2|ontology_enrichment_development_v019=CL:0000790;3.30e-26;18!CL:0002427;1.84e-14;1!CL:0002425;7.03e-08;2!CL:0000051;3.60e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002363!1.44e-07!1;UBERON:0007647!1.44e-07!1;UBERON:0010115!1.44e-07!1|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.360517241366,2.75107533924415,3.90642848099067,0,10.1035902656413,8.99550830895993,9.74133642039557,0,4.12448270464772,6.42448294292501,4.87446954777028,0,0.130059347559878,0,0,0,1.77943875794473,1.07016331235885,0,0,2.29932296161153,3.09264700934367,3.79529538029254,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:57739225..57739236,-}}
{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C23
|description=CAGE_peak_at_chr20:57739225..57739236,-
|id=chr20:57739225..57739236,-
|ontology_enrichment_celltype=CL:0000624!7.09e-40!6;CL:0000791!2.54e-28!18;CL:0000789!2.54e-28!18;CL:0002420!2.54e-28!18;CL:0002419!2.54e-28!18;CL:0000790!2.54e-28!18;CL:0000898!5.68e-21!3;CL:0000623!5.01e-20!3;CL:0000825!5.01e-20!3;CL:0000084!5.43e-20!25;CL:0000827!5.43e-20!25;CL:0000838!1.09e-18!52;CL:0000542!2.74e-18!53;CL:0000051!2.74e-18!53;CL:0000815!9.65e-15!2;CL:0000792!9.65e-15!2;CL:0002677!9.65e-15!2;CL:0002087!3.64e-12!119;CL:0000738!7.56e-10!140;CL:0000842!1.71e-09!3;CL:0002031!1.06e-08!124;CL:0000810!5.70e-08!1;CL:0000895!5.70e-08!1;CL:0002436!5.70e-08!1;CL:0002427!5.70e-08!1;CL:0002428!5.70e-08!1;CL:0002429!5.70e-08!1;CL:0002433!5.70e-08!1;CL:0002431!5.70e-08!1;CL:0002432!5.70e-08!1;CL:0000037!2.08e-07!172;CL:0000566!2.08e-07!172;CL:0000224!2.50e-07!4;CL:0000988!8.00e-07!182
|ontology_enrichment_celltype_v019=CL:0000624;9.76e-79;6!CL:0000898;1.22e-40;3!CL:0000815;5.06e-28;2!CL:0000792;5.06e-28;2!CL:0002677;5.06e-28;2!CL:0000791;3.30e-26;18!CL:0000789;3.30e-26;18!CL:0002419;3.30e-26;18!CL:0000084;8.09e-19;25!CL:0000895;1.84e-14;1!CL:0000542;3.60e-07;53
|ontology_enrichment_celltype_v019_2=CL:0000624,9.13e-79,6;CL:0000898,1.49e-40,3;CL:0000815,5.41e-28,2;CL:0000792,5.41e-28,2;CL:0002677,5.41e-28,2;CL:0000791,3.23e-26,18;CL:0000789,3.23e-26,18;CL:0002420,3.23e-26,18;CL:0002419,3.23e-26,18;CL:0000790,3.23e-26,18;CL:0000084,7.96e-19,25;CL:0000827,7.96e-19,25;CL:0000810,2.11e-14,1;CL:0000895,2.11e-14,1;CL:0002436,2.11e-14,1;CL:0002427,2.11e-14,1;CL:0002428,2.11e-14,1;CL:0002429,2.11e-14,1;CL:0002433,2.11e-14,1;CL:0002431,2.11e-14,1;CL:0002432,2.11e-14,1;CL:0000838,6.28e-12,52;CL:0000542,1.08e-11,53;CL:0000051,1.08e-11,53;CL:0000893,7.52e-08,2;CL:0002489,7.52e-08,2;CL:0000809,7.52e-08,2;CL:0000808,7.52e-08,2;CL:0000894,7.52e-08,2;CL:0000806,7.52e-08,2;CL:0000807,7.52e-08,2;CL:0000805,7.52e-08,2;CL:0002425,7.52e-08,2
|ontology_enrichment_development_v019=CL:0000790;3.30e-26;18!CL:0002427;1.84e-14;1!CL:0002425;7.03e-08;2!CL:0000051;3.60e-07;53
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002363!1.44e-07!1;UBERON:0007647!1.44e-07!1;UBERON:0010115!1.44e-07!1
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.360517241366,2.75107533924415,3.90642848099067,0,10.1035902656413,8.99550830895993,9.74133642039557,0,4.12448270464772,6.42448294292501,4.87446954777028,0,0.130059347559878,0,0,0,1.77943875794473,1.07016331235885,0,0,2.29932296161153,3.09264700934367,3.79529538029254,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr20:57739225..57739236,-
}}

Revision as of 12:32, 21 January 2014

Short description:p@chr20:57739225..57739236, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr20:57739225..57739236, -
Coexpression cluster:C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
2
4
6
8
10
12




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr20:57739225..57739236,-&oldid=3190374"