FFCP PHASE1:Hg19::chr22:31485715..31485747,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11126 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=73bp_to_ENST00000466272_5end | |||
|description=CAGE_peak_8_at_SMTN_5end | |||
|id=chr22:31485715..31485747,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;6.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,4.08e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.31e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.67e-11!365;UBERON:0002100!4.84e-09!216;UBERON:0003102!1.19e-08!95;UBERON:0005256!9.30e-08!143;UBERON:0000481!1.90e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;3.19e-07;15!UBERON:0004151;3.60e-07;3!UBERON:0003978;5.48e-07;3!UBERON:0000946;5.48e-07;3!UBERON:0002190;6.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.99e-11,114;UBERON:0004876,5.75e-10,11;UBERON:0003064,8.06e-09,28;UBERON:0000080,5.86e-08,9;UBERON:0002120,5.86e-08,9;UBERON:0004875,5.86e-08,9;UBERON:0005721,5.86e-08,9;UBERON:0005754,5.86e-08,9;UBERON:0007297,5.86e-08,9;UBERON:0004151,3.61e-07,3;UBERON:0000353,3.66e-07,15;UBERON:0003978,3.72e-07,3;UBERON:0009751,3.72e-07,3;UBERON:0000946,3.72e-07,3;UBERON:0002523,3.72e-07,3;UBERON:0005983,3.72e-07,3;UBERON:0002165,3.72e-07,3;UBERON:0002062,3.72e-07,3;UBERON:0007280,3.72e-07,3;UBERON:0002190,4.08e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0,2.53299878168311,1.89515962028049,0,0.245733936501509,1.39560233594486,0,0.527533956456907,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.410623275218653,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0,0.795285947051099,0,0,0,0.175669571386252,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0.872188104285069,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.747243402759005,0.23486899728753,0.323745888736263,0,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0,0,0,0.250237039743928,0.277064115484183,0.877955241761676,0,0.751190294532984,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0,0,0.337552664482532,0,0,0.184099797284599,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0.36497735907583,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0.98775256867763,0,1.00528972411631,0.0925884451585296,0.325808305310325,2.07986957055916,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0.414656231081544,0,0,0,0.381988425558278,1.17217447210047,0,0,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0.845302752556,0.797814349754612,0,0.257207374262142,0,1.0656887160644,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.415941723061614,0,0,0,0,2.27407504055985,1.03473071292505,0,0,0.260650843404249,0,0.343143423810856,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0.362578348774867,2.20557117333613,0.644566922551274,0.114814448164607,0.364182336013434,0.786746489756545,0,0.15403067420883,0,0,0.105551628892876,0,0.680374821106063,0,3.08454505380579,0,1.00337954770971,0,0,1.11937377361089,0,0,0,0,0,0.309123034943167,0,0,0,1.30012049207304,0,0.096670718292122,0,0.460511024178389,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0.616067160352178,2.12922412126809,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,1.32687795048244,1.31535265576129,0,0,0,0.92947049429925,0.281695602532241,0.286822704408103,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.673554789078584,0,0,0.282431402330337,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,4.68826173670061,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,2.19172787076177,0,0,0.102268682502155,0,0.622079175323615,0,0.179021174675609,0,1.1837208676432,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,1.52581736317083,0.442317039724898,0,0,0,0.139423744278603,1.23120413606075,0.113942055847001,0,0.897576444097721,0.108647371922008,0,0.641183153813036,0,0,0,0,0,0,0,0.189753732724185,0,0.421996129056054,0.163232808159148,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0.394584402849391,1.20990716048664,0,0,0.901940516486955,0,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.873633341210151,0,0,0,0,1.64881328030313,0,0,0,0,0,0.195551382734803,0,4.90941887900511,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,1.67569440763353,3.66656678418694,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0,0,0,0,0.236417121897595,0,0,0.179287339332845,0,2.1440859791201,2.64836788146173,0,1.62899880526114,0,0.653174720218818,1.19730191562487,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.427149650270779,1.25763444079733,2.89967338743037,0.496166021811951,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0,0,0,0.332787154610557,0,0.276697269872462,0.249960815924213,0,0,0,0,0.144921028610825,0.298509605773748,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0.147855149989634,0,0.4498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| |||
|short_description=p8@SMTN | |||
}} |
Revision as of 15:20, 21 January 2014
Short description: | p8@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SMTN_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_ENST00000466272_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 4.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.99e-11 | 114 |
urogenital ridge | 5.75e-10 | 11 |
intermediate mesoderm | 8.06e-09 | 28 |
mesonephros | 5.86e-08 | 9 |
pronephros | 5.86e-08 | 9 |
nephrogenic cord | 5.86e-08 | 9 |
pronephric mesoderm | 5.86e-08 | 9 |
rostral part of nephrogenic cord | 5.86e-08 | 9 |
presumptive pronephric mesoderm | 5.86e-08 | 9 |
cardiac chamber | 3.61e-07 | 3 |
parenchyma | 3.66e-07 | 15 |
valve | 3.72e-07 | 3 |
cardiac mesenchyme | 3.72e-07 | 3 |
cardial valve | 3.72e-07 | 3 |
tunica intima | 3.72e-07 | 3 |
heart layer | 3.72e-07 | 3 |
endocardium | 3.72e-07 | 3 |
endocardial cushion | 3.72e-07 | 3 |
presumptive endocardium | 3.72e-07 | 3 |
subcutaneous adipose tissue | 4.08e-07 | 3 |