FFCP PHASE1:Hg19::chr3:112931527..112931557,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C382 | |||
|description=CAGE_peak_at_chr3:112931527..112931557,- | |||
|id=chr3:112931527..112931557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.06e-13;2!CL:0002603;3.82e-09;3!CL:0002616;4.97e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,3.99e-09,3;CL:0002616,3.01e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.45e-07;1!UBERON:0000358;1.91e-07;1!UBERON:0010227;1.91e-07;1!UBERON:0008801;4.97e-07;1!UBERON:0004874;4.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.60e-21!115;UBERON:0002346!2.07e-17!90;UBERON:0005743!3.25e-17!86;UBERON:0003075!4.57e-17!86;UBERON:0007284!4.57e-17!86;UBERON:0001017!8.29e-17!82;UBERON:0000073!2.84e-16!94;UBERON:0001016!2.84e-16!94;UBERON:0001049!1.43e-15!57;UBERON:0005068!1.43e-15!57;UBERON:0006241!1.43e-15!57;UBERON:0007135!1.43e-15!57;UBERON:0000924!1.79e-15!173;UBERON:0006601!1.79e-15!173;UBERON:0004121!4.98e-15!169;UBERON:0002616!8.82e-15!59;UBERON:0000153!1.73e-14!129;UBERON:0007811!1.73e-14!129;UBERON:0000955!6.15e-14!69;UBERON:0006238!6.15e-14!69;UBERON:0000033!6.30e-13!123;UBERON:0003076!2.45e-10!15;UBERON:0003057!2.45e-10!15;UBERON:0001869!2.32e-09!32;UBERON:0001893!2.38e-09!34;UBERON:0002020!4.13e-09!34;UBERON:0003528!4.13e-09!34;UBERON:0003056!5.24e-09!61;UBERON:0002791!9.81e-09!33;UBERON:0000475!1.16e-08!365;UBERON:0004733!1.53e-08!12;UBERON:0002028!1.53e-08!12;UBERON:0007277!1.53e-08!12;UBERON:0000956!4.05e-08!25;UBERON:0000203!4.05e-08!25;UBERON:0003080!4.29e-08!42;UBERON:0004732!1.26e-07!13;UBERON:0002780!1.89e-07!41;UBERON:0001890!1.89e-07!41;UBERON:0006240!1.89e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;6.46e-13;2!UBERON:0000094;6.46e-13;2!UBERON:0010743;6.46e-13;2!UBERON:0004733;4.72e-08;12!UBERON:0002028;4.72e-08;12!UBERON:0002363;1.45e-07;1!UBERON:0002079;1.91e-07;1!UBERON:0004732;1.95e-07;13!UBERON:0006834;4.97e-07;1!UBERON:0001831;4.97e-07;1!UBERON:0000989;4.97e-07;1!UBERON:0001301;4.97e-07;1!UBERON:0008811;4.97e-07;1!UBERON:0001567;4.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,1.07e-12,2;UBERON:0000094,1.07e-12,2;UBERON:0010743,1.07e-12,2;UBERON:0003076,1.50e-09,15;UBERON:0003057,1.50e-09,15;UBERON:0007023,3.13e-08,114;UBERON:0004733,5.29e-08,12;UBERON:0002028,5.29e-08,12;UBERON:0007277,5.29e-08,12;UBERON:0002363,1.46e-07,1;UBERON:0007645,1.46e-07,1;UBERON:0007647,1.46e-07,1;UBERON:0010115,1.46e-07,1;UBERON:0002079,2.10e-07,1;UBERON:0004732,2.16e-07,13;UBERON:0001301,2.84e-07,1;UBERON:0000989,3.82e-07,1;UBERON:0008811,3.82e-07,1;UBERON:0006258,3.82e-07,1;UBERON:0005876,3.82e-07,1;UBERON:0004874,3.82e-07,1;UBERON:0006834,5.45e-07,1;UBERON:0001831,8.67e-07,1;UBERON:0001567,8.67e-07,1;UBERON:0008801,8.67e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,2.33930010345897,0.408001382488506,3.13454721478088,0.286235987131057,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,1.00267582127178,0.869079113764942,0,0.973269740605272,1.60709189178915,0.221729397462564,0.351339142772504,0.72038491523742,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0.323745888736263,0.280901613404497,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,0.847727604638247,0,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.974370051611986,0.504867548488229,0.276149695926898,0.484938170456436,0,0,0.339121184620975,0,0,0,0.121973706129595,0,0.232387885739037,0.829288440122964,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0.763976851116555,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.77866236955724,3.90419561572865,0,0.335032530668698,0,0,0,0,0.49076596687656,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0.260650843404249,0.783204629850962,1.37257369524342,0,0,0,0,0,0.30239029332968,0,0,0,0.896974044789907,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0,0.183138929636687,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.534192213880424,0.165284915360978,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,1.10273068709225,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.703347082052564,0.111308705022906,0,0.211125408127993,0.996239941255349,0,0.251932747854276,0.20453736500431,0,0.311039587661807,0,0,0,1.7755813014648,0,0,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0.173624994933292,0,0.241192877250816,0,0.442317039724898,0.886642856860642,1.09692698576986,0,0,1.00035336054936,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.83309043480088,0.296521128680622,0.247127877893006,0,0.337005664903385,0,0,0,0,0,0.394584402849391,0,0.61214552326098,13.9642340978958,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0.347119476670262,0,0,1.7472666824203,0,0,0,0,0.872901148395775,0,1.58186518546373,0,0,0.443175571691151,0.195551382734803,0,0.213452994739353,0.799238438328521,0,0,0,0,0.124252535565433,0.235694034616795,0.67952103036807,0.732219924186332,0,0,0,0.410716136675979,0,0,0.525774708558629,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.607495566580247,0,0,0.262272940674991,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,1.14681839138014,0.110929051536852,0.683060432355218,0,0,0,0,0,0.936669811613763,0.144921028610825,0.447764408660622,0.467426619694449,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,1.09209638192014,0,0.850299680406731,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,1.64093091392604,0.252071696221718,0.553258019713743,0.322951291263702,0,0,0,0.366857197043358,0,1.1441462864015,0,0,1.20336525358812,0.60511520611056,0,0,0,0,0.607838261565552,0,0.206686796501184,0.380494861163441,0,1.09651553371436,1.48863353516788,0.351742488719241,0,0,0,0,0,0.266107110487916,0,0,1.2914249265598,0.460409414939944,0.118193840883968,0,0.941917114206168,0.157115589916002,0,0,0,0.47775168788705,2.7875852228896,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0,0,0.647428837187895,0.821302454849976,1.1598144313382,0.485710993059139,0.935757853848423,0,0,0,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| |||
|short_description=p@chr3:112931527..112931557,- | |||
}} |
Revision as of 20:35, 21 January 2014
Short description: | p@chr3:112931527..112931557, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112931527..112931557, - |
Coexpression cluster: | C382_dura_Preadipocyte_Adipocyte_Astrocyte_trachea_diaphragm_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 3.99e-09 | 3 |
perirenal adipocyte cell | 3.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
meninx | 1.07e-12 | 2 |
membrane organ | 1.07e-12 | 2 |
meningeal cluster | 1.07e-12 | 2 |
posterior neural tube | 1.50e-09 | 15 |
chordal neural plate | 1.50e-09 | 15 |
adult organism | 3.13e-08 | 114 |
segmental subdivision of hindbrain | 5.29e-08 | 12 |
hindbrain | 5.29e-08 | 12 |
presumptive hindbrain | 5.29e-08 | 12 |
dura mater | 1.46e-07 | 1 |
future meninx | 1.46e-07 | 1 |
ectomeninx | 1.46e-07 | 1 |
future dura mater | 1.46e-07 | 1 |
left cardiac atrium | 2.10e-07 | 1 |
segmental subdivision of nervous system | 2.16e-07 | 13 |
epididymis | 2.84e-07 | 1 |
penis | 3.82e-07 | 1 |
intromittent organ | 3.82e-07 | 1 |
lateral plate mesenchyme | 3.82e-07 | 1 |
undifferentiated genital tubercle | 3.82e-07 | 1 |
somatopleure | 3.82e-07 | 1 |
uterus or analog | 5.45e-07 | 1 |
parotid gland | 8.67e-07 | 1 |
cheek | 8.67e-07 | 1 |
parotid gland primordium | 8.67e-07 | 1 |