FFCP PHASE1:Hg19::chr3:119014478..119014500,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:119014478..119014500,+ | |||
|id=chr3:119014478..119014500,+ | |||
|ontology_enrichment_celltype=CL:0000990!1.89e-14!8;CL:0000451!2.07e-11!10;CL:0000840!1.30e-10!5;CL:0001029!1.30e-10!5;CL:0000453!6.71e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;4.31e-37;2!CL:0001016;4.31e-37;2!CL:0000840;1.12e-27;5!CL:0002603;3.59e-25;3!CL:0000990;1.04e-18;8!CL:0000453;1.68e-15;5!CL:0000451;1.94e-15;10!CL:0000128;2.24e-11;7!CL:0000126;2.24e-11;7!CL:0000127;2.24e-11;7!CL:0000346;2.71e-07;3!CL:1000428;2.71e-07;3!CL:0002577;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.94e-37,2;CL:0001016,3.94e-37,2;CL:0000840,1.23e-27,5;CL:0001029,1.23e-27,5;CL:0002603,4.87e-25,3;CL:0000990,1.10e-18,8;CL:0000453,1.62e-15,5;CL:0000451,2.04e-15,10;CL:0000128,2.55e-11,7;CL:0000126,2.55e-11,7;CL:0000127,2.55e-11,7;CL:0002453,2.55e-11,7;CL:0002577,2.32e-07,3;CL:0000346,2.47e-07,3;CL:1000428,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.97e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.63e-12!57;UBERON:0005068!8.63e-12!57;UBERON:0006241!8.63e-12!57;UBERON:0007135!8.63e-12!57;UBERON:0002616!3.03e-11!59;UBERON:0001017!8.61e-10!82;UBERON:0007023!1.02e-09!115;UBERON:0000955!3.64e-09!69;UBERON:0006238!3.64e-09!69;UBERON:0005743!5.65e-09!86;UBERON:0003076!7.54e-09!15;UBERON:0003057!7.54e-09!15;UBERON:0002020!3.01e-08!34;UBERON:0003528!3.01e-08!34;UBERON:0003075!3.08e-08!86;UBERON:0007284!3.08e-08!86;UBERON:0000073!3.54e-08!94;UBERON:0001016!3.54e-08!94;UBERON:0001893!3.90e-08!34;UBERON:0002680!4.76e-08!9;UBERON:0001895!4.76e-08!9;UBERON:0010092!4.76e-08!9;UBERON:0001869!7.54e-08!32;UBERON:0002346!1.51e-07!90;UBERON:0002791!1.68e-07!33;UBERON:0004733!2.10e-07!12;UBERON:0002028!2.10e-07!12;UBERON:0007277!2.10e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;2.97e-19;1!UBERON:0002037;4.13e-13;6!UBERON:0002680;4.70e-09;9!UBERON:0001895;4.70e-09;9!UBERON:0000412;2.71e-07;3!UBERON:0001992;2.71e-07;3!UBERON:0004733;5.23e-07;12!UBERON:0002028;5.23e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,3.25e-19,1;UBERON:0002037,4.81e-13,6;UBERON:0006215,4.81e-13,6;UBERON:0002680,5.20e-09,9;UBERON:0001895,5.20e-09,9;UBERON:0010092,5.20e-09,9;UBERON:0000412,2.47e-07,3;UBERON:0001992,2.47e-07,3;UBERON:0004733,5.64e-07,12;UBERON:0002028,5.64e-07,12;UBERON:0007277,5.64e-07,12 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,4.18611597461079,0.612002073732759,1.25381888591235,0.572471974262113,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0.324547393654683,0.348259474598534,1.32957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,1.97065295158377,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,2.27407504055985,0,0,0,0,0,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.824125183365091,0.742585499285292,0,0,0,0,0,0.307007349452259,0,0.429680979473094,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.890894042497916,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494255755786011,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,1.20930250476107,0,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,1.5476039091159,0.303747783290123,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0.544017803369474,0.7520696820681,0.612691153526923,0.655745261419609,0,0,0,0.250381861413,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0.490696182767533,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0.611923411718232,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.186224142887574,0,0.190941474834495,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.366724332548599,0,1.33151354837103,0,0 | |||
|short_description=p@chr3:119014478..119014500,+ | |||
}} |
Revision as of 20:45, 21 January 2014
Short description: | p@chr3:119014478..119014500, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:119014478..119014500, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.94e-37 | 2 |
immature CD1a-positive Langerhans cell | 3.94e-37 | 2 |
immature conventional dendritic cell | 1.23e-27 | 5 |
common dendritic progenitor | 1.23e-27 | 5 |
astrocyte of the cerebellum | 4.87e-25 | 3 |
conventional dendritic cell | 1.10e-18 | 8 |
Langerhans cell | 1.62e-15 | 5 |
dendritic cell | 2.04e-15 | 10 |
oligodendrocyte | 2.55e-11 | 7 |
macroglial cell | 2.55e-11 | 7 |
astrocyte | 2.55e-11 | 7 |
oligodendrocyte precursor cell | 2.55e-11 | 7 |
placental epithelial cell | 2.32e-07 | 3 |
hair follicle dermal papilla cell | 2.47e-07 | 3 |
stem cell of epidermis | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vagina | 3.25e-19 | 1 |
cerebellum | 4.81e-13 | 6 |
rhombic lip | 4.81e-13 | 6 |
regional part of metencephalon | 5.20e-09 | 9 |
metencephalon | 5.20e-09 | 9 |
future metencephalon | 5.20e-09 | 9 |
dermal papilla | 2.47e-07 | 3 |
papillary layer of dermis | 2.47e-07 | 3 |
segmental subdivision of hindbrain | 5.64e-07 | 12 |
hindbrain | 5.64e-07 | 12 |
presumptive hindbrain | 5.64e-07 | 12 |