FFCP PHASE1:Hg19::chr5:131993856..131993873,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3596 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5973 | |||
|TSSclassifier=weak | |||
|UniProt=P35225,Q4VB53 | |||
|association_with_transcript=0bp_to_ENST00000304506,ENST00000462480,NM_002188,uc003kxj.1_5end | |||
|coexpression_cluster_id=C343 | |||
|description=CAGE_peak_1_at_IL13_5end | |||
|id=chr5:131993856..131993873,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.05e-18!140;CL:0000037!1.87e-15!172;CL:0000566!1.87e-15!172;CL:0002032!2.40e-15!165;CL:0000837!2.40e-15!165;CL:0000988!3.42e-15!182;CL:0002031!9.75e-15!124;CL:0002274!1.11e-11!5;CL:0000457!1.11e-11!5;CL:0002191!1.11e-11!5;CL:0000097!1.11e-11!5;CL:0000831!1.11e-11!5;CL:0002028!1.11e-11!5;CL:0000766!8.68e-11!76;CL:0000763!1.47e-10!112;CL:0000049!1.47e-10!112;CL:0002087!1.37e-09!119;CL:0000839!2.22e-09!70;CL:0000557!3.47e-09!71;CL:0002057!1.18e-08!42;CL:0000860!6.56e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.74e-19;5!CL:0000163;9.32e-11;9!CL:0000860;3.14e-09;33!CL:0002057;3.14e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.74e-19,5;CL:0002028,6.74e-19,5;CL:0000839,9.16e-11,66;CL:0000163,9.32e-11,9;CL:0000557,1.37e-10,67;CL:0002031,5.41e-10,120;CL:0000766,8.81e-10,72;CL:0000738,1.31e-08,136;CL:0000860,5.56e-08,42;CL:0002057,5.56e-08,42;CL:0002032,5.42e-07,161;CL:0000837,5.42e-07,161;CL:0000473,6.26e-07,48;CL:0000234,6.26e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;9.57e-12;1!DOID:0060061;9.57e-12;1!DOID:8691;9.57e-12;1!DOID:630;4.22e-11;1!DOID:0050177;4.22e-11;1!DOID:0050427;4.22e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.57e-12,1;DOID:0060061,9.57e-12,1;DOID:8691,9.57e-12,1;DOID:630,3.63e-11,1;DOID:0050177,3.63e-11,1;DOID:0050427,3.63e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.68e-11!102;UBERON:0003061!6.68e-11!102;UBERON:0002193!1.59e-10!112;UBERON:0002405!3.64e-08!115;UBERON:0002371!9.85e-08!80;UBERON:0004177!2.59e-07!7;UBERON:0001474!6.13e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.27e-09,76;UBERON:0001474,1.85e-08,82;UBERON:0004765,1.31e-07,90;UBERON:0002405,2.50e-07,93;UBERON:0002390,6.75e-07,98;UBERON:0003061,6.75e-07,98;UBERON:0001434,9.77e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,2.61188314765726,3.97169657283798,1.86846674698672,0,0.521482918420201,0,2.42159801053347,3.31449872388808,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.205601498999509,1.17030546773475,0,0,0,322.756093596348,0.883817722424512,0.221533894583621,0.270803863765016,204.305654962452,219.540178681074,22.3635550261,15.7519510137934,6.95527405764126,0,0,0,3.05935225283429,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,112.819881478171,0,32.5505141399012,0.576479813667846,32.9492751242852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.0671169533833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,286.581938260115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.322944549180031,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8851164307291 | |||
|short_description=p1@IL13 | |||
}} |
Revision as of 07:21, 22 January 2014
Short description: | p1@IL13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL13_5end |
Coexpression cluster: | C343_CD4_mycosis_kidney_signet_hairy_b_Mast |
Association with transcript: | 0bp_to_ENST00000304506, ENST00000462480, NM_002188, uc003kxj.1_5end |
EntrezGene: | IL13 |
HGNC: | 5973 |
UniProt: | P35225Q4VB53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.74e-19 | 5 |
basophil mast progenitor cell | 6.74e-19 | 5 |
myeloid lineage restricted progenitor cell | 9.16e-11 | 66 |
endocrine cell | 9.32e-11 | 9 |
granulocyte monocyte progenitor cell | 1.37e-10 | 67 |
hematopoietic lineage restricted progenitor cell | 5.41e-10 | 120 |
myeloid leukocyte | 8.81e-10 | 72 |
leukocyte | 1.31e-08 | 136 |
classical monocyte | 5.56e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.56e-08 | 42 |
hematopoietic oligopotent progenitor cell | 5.42e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-07 | 161 |
defensive cell | 6.26e-07 | 48 |
phagocyte | 6.26e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.27e-09 | 76 |
bone element | 1.85e-08 | 82 |
skeletal element | 1.31e-07 | 90 |
immune system | 2.50e-07 | 93 |
hematopoietic system | 6.75e-07 | 98 |
blood island | 6.75e-07 | 98 |
skeletal system | 9.77e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.57e-12 | 1 |
cutaneous T cell lymphoma | 9.57e-12 | 1 |
mycosis fungoides | 9.57e-12 | 1 |
genetic disease | 3.63e-11 | 1 |
monogenic disease | 3.63e-11 | 1 |
xeroderma pigmentosum | 3.63e-11 | 1 |