FFCP PHASE1:Hg19::chr6:64281675..64281712,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=7803 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9634 | |||
|TSSclassifier=strong | |||
|UniProt=Q93096 | |||
|association_with_transcript=-207bp_to_NM_003463,uc003pel.2_5end | |||
|description=CAGE_peak_33_at_PTP4A1_5end | |||
|id=chr6:64281675..64281712,+ | |||
|ontology_enrichment_celltype=CL:0002150!3.62e-10!3;CL:0000861!3.62e-10!3;CL:0000624!9.69e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000898;1.17e-16;3!CL:0000895;6.82e-13;1!CL:0000624;8.57e-09;6!CL:0000815;2.58e-07;2!CL:0000792;2.58e-07;2!CL:0002677;2.58e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,8.55e-17,3;CL:0000810,4.23e-13,1;CL:0000895,4.23e-13,1;CL:0002436,4.23e-13,1;CL:0002427,4.23e-13,1;CL:0002428,4.23e-13,1;CL:0002429,4.23e-13,1;CL:0002433,4.23e-13,1;CL:0002431,4.23e-13,1;CL:0002432,4.23e-13,1;CL:0000624,7.33e-09,6;CL:0000815,2.58e-07,2;CL:0000792,2.58e-07,2;CL:0002677,2.58e-07,2;CL:0000893,3.48e-07,2;CL:0002489,3.48e-07,2;CL:0000809,3.48e-07,2;CL:0000808,3.48e-07,2;CL:0000894,3.48e-07,2;CL:0000806,3.48e-07,2;CL:0000807,3.48e-07,2;CL:0000805,3.48e-07,2;CL:0002425,3.48e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;6.82e-13;1!CL:0002425;4.42e-07;2 | |||
|ontology_enrichment_disease=DOID:305!4.83e-08!106;DOID:0050687!2.30e-07!143;DOID:1909!5.83e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.17e-26!9;UBERON:0001557!2.75e-20!19;UBERON:0000072!3.53e-11!46;UBERON:0000065!3.13e-09!53;UBERON:0008947!5.14e-09!38;UBERON:0003258!5.14e-09!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.83e-12;9!UBERON:0001557;3.83e-12;9!UBERON:0001905;2.15e-07;2!UBERON:0002757;2.15e-07;2!UBERON:0010134;2.15e-07;2!UBERON:0005408;2.15e-07;2!UBERON:0001899;2.15e-07;2!UBERON:0003127;3.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.64e-12,9;UBERON:0001557,5.73e-10,19;UBERON:0001905,2.15e-07,2;UBERON:0002757,2.15e-07,2;UBERON:0010134,2.15e-07,2;UBERON:0005408,2.15e-07,2;UBERON:0001899,2.15e-07,2;UBERON:0003127,3.09e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,3.58514493296949,2.36723902867367,3.89653456815823,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,5.93146252648242,2.1403266247177,3.1360657141493,0,1.53288197440768,0.34362744548263,1.51811815211702,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.661763836394364,1.08939722046203,0.237270619111097,1.07865046528132,0.98110732562673,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677294319023596,1.24251839046515,0.574808199372465,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0,0.202210631562555,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42842203053944,0,0,0,0,0,0,0.135939465953663,0,0.354581522651905,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,2.15166616178029,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p33@PTP4A1 | |||
}} |
Revision as of 12:29, 22 January 2014
Short description: | p33@PTP4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_33_at_PTP4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -207bp_to_NM_003463, uc003pel.2_5end |
EntrezGene: | PTP4A1 |
HGNC: | 9634 |
UniProt: | Q93096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 8.55e-17 | 3 |
CD4-positive, alpha-beta thymocyte | 4.23e-13 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.23e-13 | 1 |
mature CD4 single-positive thymocyte | 4.23e-13 | 1 |
resting double-positive thymocyte | 4.23e-13 | 1 |
double-positive blast | 4.23e-13 | 1 |
CD69-positive double-positive thymocyte | 4.23e-13 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.23e-13 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.23e-13 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.23e-13 | 1 |
CD4-positive, alpha-beta T cell | 7.33e-09 | 6 |
regulatory T cell | 2.58e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.58e-07 | 2 |
naive regulatory T cell | 2.58e-07 | 2 |
thymocyte | 3.48e-07 | 2 |
double negative thymocyte | 3.48e-07 | 2 |
double-positive, alpha-beta thymocyte | 3.48e-07 | 2 |
DN4 thymocyte | 3.48e-07 | 2 |
DN1 thymic pro-T cell | 3.48e-07 | 2 |
DN2 thymocyte | 3.48e-07 | 2 |
DN3 thymocyte | 3.48e-07 | 2 |
immature single positive thymocyte | 3.48e-07 | 2 |
early T lineage precursor | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.64e-12 | 9 |
upper respiratory tract | 5.73e-10 | 19 |
pineal body | 2.15e-07 | 2 |
regional part of epithalamus | 2.15e-07 | 2 |
secretory circumventricular organ | 2.15e-07 | 2 |
circumventricular organ | 2.15e-07 | 2 |
epithalamus | 2.15e-07 | 2 |
open tracheal system trachea | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.69e-07 | 2 |