FFCP PHASE1:Hg19::chr6:74104859..74104904,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441161 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21382 | |||
|TSSclassifier=strong | |||
|UniProt=C9J915 | |||
|association_with_transcript=-3bp_to_ENST00000441145_5end | |||
|coexpression_cluster_id=C1978 | |||
|description=CAGE_peak_1_at_OOEP_5end | |||
|id=chr6:74104859..74104904,- | |||
|ontology_enrichment_celltype=CL:0000039!4.54e-07!7;CL:0000586!4.54e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.49e-13;7!CL:0000586;4.49e-13;7!CL:0000349;4.30e-08;19!CL:0002541;5.40e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.53e-13,7;CL:0000586,4.53e-13,7;CL:0000349,4.05e-08,19;CL:0002541,5.83e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.25e-14,143;DOID:305,1.14e-09,106;DOID:162,2.02e-09,235;DOID:14566,5.42e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000464!3.41e-09!104;UBERON:0004458!4.60e-09!49;UBERON:0002553!6.46e-09!70;UBERON:0003886!7.44e-09!63;UBERON:0002323!4.74e-08!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002075;1.51e-09;18!UBERON:0001264;1.86e-08;10!UBERON:0002110;4.11e-08;3!UBERON:0003124;5.40e-08;3!UBERON:0000920;5.40e-08;3!UBERON:0002323;5.60e-08;45!UBERON:0000473;9.36e-08;8!UBERON:0000478;1.52e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,8.54e-12,7;UBERON:0004458,4.45e-10,49;UBERON:0002075,1.34e-09,18;UBERON:0002323,1.46e-09,46;UBERON:0005631,2.38e-09,14;UBERON:0000158,2.38e-09,14;UBERON:0001264,1.83e-08,10;UBERON:0002553,2.56e-08,61;UBERON:0002110,3.29e-08,3;UBERON:0006242,3.29e-08,3;UBERON:0000920,5.83e-08,3;UBERON:0000473,1.06e-07,8;UBERON:0003886,1.46e-07,54;UBERON:0000478,1.48e-07,24 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0.655324116390517,1.58260186937072,0.247532705920093,0,0,0,0,0,0.61560529038394,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0,0,0.485168122375632,0,0,0,0,0,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0.400395987036012,0,0,0,1.70763890732835,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0.294605907474837,1.10766947291811,1.08321545506006,0.384273959177026,0.650296737799391,0.164437904603676,0.552700035571697,0,0,0.267540828089713,0,0.113309342697566,0.383220493601921,1.03088233644789,0.759059076058509,0,0,0.950452044448374,0.602300476311091,1.02389288923535,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0,0.722878304769133,0.50133791063589,1.01392563272577,0.795285947051099,0.486634870302636,0.378139268656271,0,0,0.654895377488563,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,2.63560834872127,0,1.3082821564276,0,1.64619665163954,0.662045904066094,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0.286804595389004,2.5614478287215,0.265059536642971,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0,0.234817388471643,0,0.462985512576611,0,6.3216351836742,9.4433477830436,0,0.234004265139238,0,0,0.839910640994298,0.425325291727159,0,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,2.46972101034231,0.325736184293735,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,1.14861935834114,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0.414415513436035,0.49076596687656,1.50051156317903,0.542530047399471,0,0,0.630809660135739,0,0,0,0,0,0,0,0.195801157462741,0,0.620304078368662,0.862856803274467,0.106727557803444,0.303127571446259,1.66435439510497,3.0239029332968,0,0.460385919864187,0.561320188866147,0.384417447767103,2.55853624533352,0.482561763430822,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0,0.262248829918848,1.80479845162965,0.385076685522074,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0.863663664408557,0,0.541892875087706,0.501689773854853,0,0,0.671624264166535,0,0,0,0.328014645699706,0.976135183992909,0.515205058238611,0,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.725083469571143,0,0,0,0.192190067365106,0.765676274967505,1.2138933702666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0,0,1.15755106853338,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0.288666338176536,0,1.08890984861323,1.12972560932135,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,3.59845090630601,0,0,0,0,0,0,0.1605880751037,1.21079824314629,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,1.8204078262427,0,6.25099522974109,1.43246690842614,0.296964680832639,0.307160702099232,0,0.140669416410513,0,1.97764649072111,0.211125408127993,0.996239941255349,0,0,0,0,0,2.78591888556713,0,0,0.493217028184668,0,0,0,0,0,1.82299432759663,0,0,4.09656413827799,1.01701460117107,0,2.75794698593172,0,0,0,0,3.05163472634166,0.221158519862449,0,0.219385397153973,0,1.67308493134324,0.153900517007594,0,2.99733075704478,13.7329195946951,2.28159481036217,3.50901275705111,2.28993983504656,4.79731298416771,0,0,0,0,0,0,0,0,0,8.97780444875312,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0,0,2.93496928398135,0,0,0,0,0.189559738885464,0,0,5.98188485436467,8.93678280863847,5.02292669451561,2.38944859545918,0,0,0,0,0,0,7.22341336380789,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,6.4531956302485,9.93969371119018,1.49417096317547,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.78741985211799,0,0,0.136203406111576,0.160753148465019,0,0.83088067605837,0,0,0.0607495566580247,5.36695500158826,0.0788057072991982,0.052454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| |||
|short_description=p1@OOEP | |||
}} |
Revision as of 12:39, 22 January 2014
Short description: | p1@OOEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OOEP_5end |
Coexpression cluster: | C1978_testicular_epithelioid_embryonic_gall_signet_large_choriocarcinoma |
Association with transcript: | -3bp_to_ENST00000441145_5end |
EntrezGene: | OOEP |
HGNC: | 21382 |
UniProt: | C9J915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.53e-13 | 7 |
germ cell | 4.53e-13 | 7 |
extraembryonic cell | 4.05e-08 | 19 |
chorionic membrane mesenchymal stem cell | 5.83e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 8.54e-12 | 7 |
body cavity or lining | 4.45e-10 | 49 |
viscus | 1.34e-09 | 18 |
body cavity | 1.46e-09 | 46 |
extraembryonic membrane | 2.38e-09 | 14 |
membranous layer | 2.38e-09 | 14 |
pancreas | 1.83e-08 | 10 |
anatomical cavity | 2.56e-08 | 61 |
gallbladder | 3.29e-08 | 3 |
gall bladder primordium | 3.29e-08 | 3 |
egg chorion | 5.83e-08 | 3 |
testis | 1.06e-07 | 8 |
body cavity precursor | 1.46e-07 | 54 |
extraembryonic structure | 1.48e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.25e-14 | 143 |
carcinoma | 1.14e-09 | 106 |
cancer | 2.02e-09 | 235 |
disease of cellular proliferation | 5.42e-09 | 239 |