FFCP PHASE1:Hg19::chr6:74230164..74230193,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3189 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-378bp_to_uc003phi.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_13_at_EEF1A1_5end | |||
|id=chr6:74230164..74230193,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;9.66e-08;2!CL:0000558;9.66e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.10e-08,2;CL:0000765,9.10e-08,2;CL:0000050,9.10e-08,2;CL:0000038,9.10e-08,2;CL:0000558,9.10e-08,2;CL:0000547,9.10e-08,2;CL:0000549,9.10e-08,2;CL:0000550,9.10e-08,2;CL:0000552,9.10e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.23e-27!115;UBERON:0001049!1.74e-11!57;UBERON:0005068!1.74e-11!57;UBERON:0006241!1.74e-11!57;UBERON:0007135!1.74e-11!57;UBERON:0001017!1.91e-09!82;UBERON:0003075!4.96e-09!86;UBERON:0007284!4.96e-09!86;UBERON:0005743!8.48e-09!86;UBERON:0002616!8.49e-09!59;UBERON:0002346!1.80e-08!90;UBERON:0002780!1.99e-08!41;UBERON:0001890!1.99e-08!41;UBERON:0006240!1.99e-08!41;UBERON:0003080!6.24e-08!42;UBERON:0000073!1.57e-07!94;UBERON:0001016!1.57e-07!94;UBERON:0000955!5.77e-07!69;UBERON:0006238!5.77e-07!69;UBERON:0002020!6.84e-07!34;UBERON:0003528!6.84e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;8.97e-09;4!UBERON:0010133;8.97e-09;4!UBERON:0001905;1.53e-08;2!UBERON:0002757;1.53e-08;2!UBERON:0010134;1.53e-08;2!UBERON:0005408;1.53e-08;2!UBERON:0001899;1.53e-08;2!UBERON:0000178;5.59e-08;15!UBERON:0000179;5.59e-08;15!UBERON:0000463;5.59e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.25e-16,114;UBERON:0003296,1.39e-08,4;UBERON:0010133,1.39e-08,4;UBERON:0001905,1.92e-08,2;UBERON:0002757,1.92e-08,2;UBERON:0010134,1.92e-08,2;UBERON:0005408,1.92e-08,2;UBERON:0001899,1.92e-08,2;UBERON:0000178,3.06e-08,15;UBERON:0000179,3.06e-08,15;UBERON:0000463,3.06e-08,15 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,1.18009283054671,0.383829398097213,0.309632246632152,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0.515151135268373,0.436194716338694,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,1.35426486594342,0.564727018627814,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0.434377689410233,0.605399502633369,0,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0.434473211648397,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.263504357079378,7.20384915237419,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.549605231791222,3.9534125230819,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,0,0.103325781175765,1.18800285728205,0,0,0,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0.194874010322397,0.252433774244115,0.184099797284599,0,0,0,0,0,0.818238361772504,0.860413786167011,0.365921118388786,0.265059536642971,0,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0.464367928031979,0,0.354920400119532,0,0.241011029883482,0.330881918197182,0.435758888184812,0.474541238222193,0.404493924480493,0.784885860501384,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0.651616610620649,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.297262324577456,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0.264145302039678,0.207328115540772,0.576479813667846,0.37872730027914,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0.224170287987055,0,1.07813787429759,0.256686072559497,0.254094624222463,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0.473107245101804,0.234282829985426,0,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0.206768026122887,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.256278298511402,1.02341449813341,0.321707842287215,1.48418066444991,0.154209693802656,0.177561725313127,0.246381468041427,0.519254429183621,0,0.120859449591622,0.40101294060657,0,0.459257792658427,0.182091168006717,0.524497659837696,0,0,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,1.31555925987561,1.3071772551245,0,0,0,0,0.183138929636687,0.165018999841176,0.574265537996172,1.30012049207304,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,1.39453664789186,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0.6196469961995,0,0,0.0982490410131212,0.7133421029625,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.192444225451024,0,0,0.470719003883896,0,0,0,0,1.52234282769651,1.52927441428475,2.27858874869665,0.952927101831156,0,0,1.62009431171434,2.37937552888281,0,0.962479855263359,0.490080431962063,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0.47003968731907,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.879049075631364,0.242721043499027,0.111443384277478,0.284136146806413,0,0,0.307160702099232,2.98244294329889,0.703347082052564,0,0,0.211125408127993,1.19548792950642,0.276283915531148,0.251932747854276,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0,0.493217028184668,2.3948309234694,0,0,0.371072392647405,0,0.260427761085233,0,0,0.341380344856499,0,0,0,0,0.173624994933292,0.885741385813839,0.241192877250816,1.52581736317083,1.10579259931225,0.886642856860642,1.53569778007781,0,0,0.153900517007594,0.227884111694002,0.23056390438806,0.179515288819544,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,0,0,0,0.19606253431774,0,0.189753732724185,0,0.210998064528027,0,0,0,0.995261931078505,0.265372693510018,0,0.296521128680622,0,0.104421949505455,0.539209063845416,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0,0,1.19472429772959,0,0,0,0,0.0870592065804026,1.57254001417827,0,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0,0,0.548167698587004,0.596143835108969,0.633107959558787,0,0,0,0,0.144090417154106,0.343609788497747,0.171594997861965,0.288109595976299,0.49701014226173,0.235694034616795,0.407712618220842,0,0,0,0,0.136905378891993,0,0,0,1.39641200636127,1.3749625440701,0,0.798716001995964,0.429226048136571,0.223171457441873,0.201550417460179,0.720599767084807,1.16495949527454,0.157566364614447,0.412079291905832,0.13480708770837,0.0984274815147488,0.0846733320657845,1.59045937961861,0.544813624446302,0.321506296930038,0.137539436597234,0.415440338029185,0.2249738915515,0.77380195455795,0.607495566580247,0,0.236417121897595,0.157363764404994,0.316801009558219,0,0,0,0.662091970365432,0,1.62899880526114,0.864221491201268,0.653174720218818,1.19730191562487,0.082092520749339,0.170388021785422,0,0.146552233678082,1.32506888912221,1.93924434542326,0.52893040697076,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0,0,0,2.72008901684737,3.2589686222951,3.982492497925,3.93447156851765,0.471162288750703,0,0.244052529803926,0.500763722825999,0.573409195690071,1.33114861844223,0.931446044120752,0.138348634936231,0,0.606596470166591,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,0.686520205190771,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,1.14241563650639,0.406870733204662,0,0.214821114084977,0.464033759878494,0.398095888698616,0.400027764663154,0.343395705182793,0,1.26184898228651,0.192619830407303,0,0,0,0,0.97894681802587,0,0,0,0.530067437837643,0.771656153083659,0.506827321959218,0.256241518587947,0.345430341731199,0.303859956177382,0.829550616910385,0,0.132864840313363,0,0,0.245772908753719,0.845248493434508,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0.314531883711793,0,0,0.212574920101683,0,0,0,0,0,0.705351887381368,0,0.256916900385838,1.41696576325585,0.319267718114302,0.41023272848151,0.252071696221718,0.276629009856872,0.968853873791107,0,0.0981477185010256,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.270150338473579,0.781078098613847,0.620060389503552,0.697573912132975,0.546974809018219,0,0,0.175871244359621,0,2.14280734351315,2.01770233331294,0,1.13831095675649,0.266107110487916,0.115233987555779,0,0.611727596791485,0.460409414939944,0,0.111231401892069,0.470958557103084,0.942693539496011,0,0.913158720509496,0,0.47775168788705,1.00067161847319,0.158013611732727,0.116241425368125,0,0,0.207216164163037,0,0,0.430227358820278,0.236664001461131,0.170426809518315,0.846774100381858,0.22910686854405,0,0,0,0,0.121917924982269,0,0.307988420568741,0,0.485710993059139,0,0,0.356760272332706,0,0.109940516745429,0.301925687133347,0.308696632431779,0.218559560503957,0,1.47088993052343,0,0.785233868459781,0.297046400327086,0.8453114551668,0,0.281951753939561,0.257831551894309,0.0999411559249289,0,0,0.0802413666891683,0.730336388246517,0.458729283404541,0.286679166302903,0,0.271965960763659,0.872701380680755,1.0580536810308,0.371995018166751,0.924351257262837,0,0.126166424835079,0,0.126698501011437,0,0,0.735159196278759,0.250707539292375,18.2626662705957,17.6856325903078,0.829169439458779,0.620597975171371,0.213233981900981,0.952257725854961,0,0.0620747142958579,0,0.636471582781649,0.808468755832877,0.653150243690884,1.02669990325584,0.471464371102113,0.645499848534087,0.332660356546013,0.162806537221949,0.213454691755431,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p13@EEF1A1 | |||
}} |
Revision as of 12:40, 22 January 2014
Short description: | p13@EEF1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_EEF1A1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -378bp_to_uc003phi.2_5end |
EntrezGene: | EEF1A1 |
HGNC: | 3189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.10e-08 | 2 |
erythroblast | 9.10e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 9.10e-08 | 2 |
erythroid progenitor cell | 9.10e-08 | 2 |
reticulocyte | 9.10e-08 | 2 |
proerythroblast | 9.10e-08 | 2 |
basophilic erythroblast | 9.10e-08 | 2 |
polychromatophilic erythroblast | 9.10e-08 | 2 |
orthochromatic erythroblast | 9.10e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.25e-16 | 114 |
gland of diencephalon | 1.39e-08 | 4 |
neuroendocrine gland | 1.39e-08 | 4 |
pineal body | 1.92e-08 | 2 |
regional part of epithalamus | 1.92e-08 | 2 |
secretory circumventricular organ | 1.92e-08 | 2 |
circumventricular organ | 1.92e-08 | 2 |
epithalamus | 1.92e-08 | 2 |
blood | 3.06e-08 | 15 |
haemolymphatic fluid | 3.06e-08 | 15 |
organism substance | 3.06e-08 | 15 |