FFCP PHASE1:Hg19::chr6:151646657..151646671,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9590 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=370 | |||
|TSSclassifier=strong | |||
|UniProt=Q02952 | |||
|association_with_transcript=0bp_to_NM_144497,uc003qof.2,uc010kim.2_5end | |||
|coexpression_cluster_id=C1972 | |||
|description=CAGE_peak_8_at_AKAP12_5end | |||
|id=chr6:151646657..151646671,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.75e-18!180;CL:0000222!6.22e-15!119;CL:0000680!7.07e-09!57;CL:0000056!7.07e-09!57;CL:0000355!7.07e-09!57;CL:0002139!1.05e-08!24;CL:0000057!1.42e-08!75;CL:0000187!3.14e-08!54;CL:0002321!6.00e-08!248;CL:0000213!8.01e-08!57;CL:0000215!8.01e-08!57;CL:0000183!8.50e-08!59;CL:0000220!9.04e-08!246;CL:0002078!1.67e-07!44;CL:0000393!9.89e-07!60;CL:0000211!9.89e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.49e-13;24!CL:0000115;2.59e-08;36!CL:0002138;3.38e-08;6!CL:0000071;1.50e-07;18!CL:0002078;1.78e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.93e-13,24;CL:0002078,4.64e-10,45;CL:0000222,4.67e-10,121;CL:0000115,4.85e-10,36;CL:0005020,3.49e-08,6;CL:0002138,3.49e-08,6;CL:0005022,3.49e-08,6;CL:0000213,5.01e-08,58;CL:0000215,5.01e-08,58;CL:0000071,1.27e-07,18;CL:0002546,1.27e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;3.38e-08;6!CL:0002546;1.50e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.27e-17!79;UBERON:0007798!1.27e-17!79;UBERON:0000477!5.24e-16!286;UBERON:0000119!7.29e-16!312;UBERON:0000483!3.26e-15!309;UBERON:0000055!2.42e-13!69;UBERON:0004535!9.98e-13!110;UBERON:0000490!1.75e-12!138;UBERON:0003914!3.71e-12!118;UBERON:0004872!4.69e-12!84;UBERON:0001009!6.02e-12!113;UBERON:0000481!1.57e-11!347;UBERON:0004111!2.66e-11!241;UBERON:0001981!2.93e-11!60;UBERON:0007500!2.93e-11!60;UBERON:0004537!2.93e-11!60;UBERON:0006965!2.93e-11!60;UBERON:0000468!3.56e-10!659;UBERON:0000486!1.35e-09!82;UBERON:0000467!1.71e-09!625;UBERON:0000475!2.02e-09!365;UBERON:0000480!2.51e-09!626;UBERON:0005256!5.49e-09!143;UBERON:0000914!9.20e-09!83;UBERON:0002329!9.20e-09!83;UBERON:0003077!9.20e-09!83;UBERON:0003059!9.20e-09!83;UBERON:0007282!9.20e-09!83;UBERON:0009618!9.20e-09!83;UBERON:0007285!9.20e-09!83;UBERON:0000025!1.08e-08!194;UBERON:0001134!2.15e-08!61;UBERON:0002036!2.15e-08!61;UBERON:0003082!2.15e-08!61;UBERON:0002385!2.52e-08!63;UBERON:0001015!2.52e-08!63;UBERON:0000383!2.52e-08!63;UBERON:0004290!4.13e-08!70;UBERON:0001637!7.71e-08!42;UBERON:0003509!7.71e-08!42;UBERON:0004572!7.71e-08!42;UBERON:0002100!8.22e-08!216;UBERON:0003104!4.28e-07!238;UBERON:0009142!4.28e-07!238;UBERON:0006914!6.49e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;7.13e-10;25!UBERON:0000487;2.28e-08;22!UBERON:0004638;1.50e-07;18!UBERON:0001986;1.50e-07;18!UBERON:0004852;1.50e-07;18!UBERON:0000490;2.97e-07;33!UBERON:0006876;5.31e-07;11!UBERON:0002049;6.99e-07;75!UBERON:0007798;6.99e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.89e-12,78;UBERON:0007798,1.89e-12,78;UBERON:0004535,5.07e-11,109;UBERON:0001009,2.12e-10,112;UBERON:0006914,5.54e-10,25;UBERON:0000490,1.44e-09,148;UBERON:0000487,1.84e-08,22;UBERON:0000119,2.08e-08,309;UBERON:0000483,2.59e-08,306;UBERON:0000055,5.61e-08,68;UBERON:0004638,1.27e-07,18;UBERON:0001986,1.27e-07,18;UBERON:0004852,1.27e-07,18;UBERON:0006876,5.52e-07,11 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,1.36142988256051,0.662794751455832,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,1.71741592278634,2.6006140763848,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.767175371061182,0.722878304769133,0,0.579386075843295,0,0,1.41802225746102,1.33037638477538,1.05401742831751,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,1.67799774483962,3.30141650328081,3.13492449805216,1.55050055501597,2.13459757612026,3.01248551488203,0.402829317109147,2.28081631715554,1.70843440283719,2.94130464276695,0,2.94689103337463,4.93964619777574,6.19363142658272,0,0,2.38162267109529,0,0,0.436094052142534,0.993943903390637,1.13967460498122,0.926864265692532,0.860509862246441,1.77334191099179,1.68203280042692,0,0.24666754841716,2.17847724779836,1.21239604862719,1.63461903113459,1.36221684880438,1.72852777344,0.234321431833797,0,0,1.79338416662161,1.87895197830024,2.5899671098901,2.94946694074722,2.24569588380383,0.491337269247072,2.9964476540972,1.18800285728205,0.247266929278557,0.910161361938026,0,1.85169725349473,2.62748891731125,2.21651292387346,0,0.30648779579902,1.20190447125277,0.794025282120147,0.358779271377724,0.427114777637135,0.423863802319124,0.300091096084402,0.824420233907511,0,0,0.506328996723799,0.0974370051611986,0.757301322732344,0.184099797284599,5.01102776138317,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0.243947412259191,0.795178609928912,0.69716365721711,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0.588664395376038,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,1.88724591328378,0,0,0.201057944823262,0.0925884451585296,0,1.03993478527958,2.88662684050547,1.27523445472584,0.587043471179108,1.44366447761074,2.31492756288305,2.66355813128438,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.766765358330422,0,0,0,0,0.12624243342638,1.52394946301206,0.763976851116555,1.17217447210047,0,1.02827492703324,0.901029173531752,1.42913216315289,0.560655421726804,0.87192013766656,1.10007428731425,0,0,1.690605505112,1.06375246633948,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,0.714889968290738,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,1.8403723757871,3.00102312635806,1.89885516589815,1.03985430765404,0.356857977594324,1.10391690523754,0.702848489956279,0,0,0,1.99267679560631,0.553107505625109,1.73767228936166,0.587403472388222,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0.160853921143607,0,1.3878872442239,0.710246901252508,1.8067974323038,1.03850885836724,2.32420756919918,0,0,0,0.229628896329213,0.546273504020151,0.655622074797121,0,0.15403067420883,1.56869953835371,0,0.316654886678627,1.13733384070897,0.680374821106063,1.72732732881711,0,0.541892875087706,0,0.764628819135115,0,0,0,0,0.256450125116389,0,0,0.721287081534056,1.00726411300178,1.23764249880882,0,0,3.21367859688319,0.48335359146061,1.69453478826109,0.767518373630648,1.65403886981437,3.22260734604821,1.74020032697074,2.21589231281862,0.0890320356467374,0,0.192190067365106,0.382838137483752,0.10115778085555,0.464845549297286,0.94443704049192,2.0911118104818,0.616067160352178,0,0,1.11194531462352,0.429374660225974,1.116475108079,1.89827654831236,0.38126038784765,0,1.71175595213568,0.636406495851874,0.78494864019923,0.359744915166629,1.09814811894422,1.64937363283961,0.606547444719948,1.58510321173008,0.842516912477962,0.48763373908959,0.974853958525138,1.05650146756755,1.09199929126389,0.282810863907425,0,0,1.32687795048244,1.31535265576129,0,0.655894752046633,0.608731130888112,1.239293992399,0.281695602532241,0.860468113224309,0.392996164052485,0.35667105148125,1.77380532035299,3.58882980006029,6.25660296623814,0.379473173765715,1.04980416073495,0.48111056362756,0,0,0.564862804660675,0,0,0.443430153536676,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,2.84136146806413,0,0,0,0,0.562677665642051,0.556543525114529,0,0,0.398495976502139,0,0.755798243562828,0.102268682502155,0,0.311039587661807,0.449341755736634,0.179021174675609,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0.568967241427498,0,0.236387681767936,0,0.583209226766509,0.173624994933292,0,0.844175070377856,4.5774520895125,2.43274371848694,1.47773809476774,0,0.653630781113941,0,0.0769502585037971,0.113942055847001,0,0,0,0.638002319463839,0.457987967009312,0.533034776018635,0,0,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| |||
|short_description=p8@AKAP12 | |||
}} |
Revision as of 14:37, 22 January 2014
Short description: | p8@AKAP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_AKAP12_5end |
Coexpression cluster: | C1972_Fibroblast_Synoviocyte_Endothelial_osteosarcoma_mature_cerebellum_alveolar |
Association with transcript: | 0bp_to_NM_144497, uc003qof.2, uc010kim.2_5end |
EntrezGene: | AKAP12 |
HGNC: | 370 |
UniProt: | Q02952 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.93e-13 | 24 |
meso-epithelial cell | 4.64e-10 | 45 |
mesodermal cell | 4.67e-10 | 121 |
endothelial cell | 4.85e-10 | 36 |
lymphangioblast | 3.49e-08 | 6 |
endothelial cell of lymphatic vessel | 3.49e-08 | 6 |
vascular lymphangioblast | 3.49e-08 | 6 |
lining cell | 5.01e-08 | 58 |
barrier cell | 5.01e-08 | 58 |
blood vessel endothelial cell | 1.27e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.89e-12 | 78 |
vascular system | 1.89e-12 | 78 |
cardiovascular system | 5.07e-11 | 109 |
circulatory system | 2.12e-10 | 112 |
squamous epithelium | 5.54e-10 | 25 |
unilaminar epithelium | 1.44e-09 | 148 |
simple squamous epithelium | 1.84e-08 | 22 |
cell layer | 2.08e-08 | 309 |
epithelium | 2.59e-08 | 306 |
vessel | 5.61e-08 | 68 |
blood vessel endothelium | 1.27e-07 | 18 |
endothelium | 1.27e-07 | 18 |
cardiovascular system endothelium | 1.27e-07 | 18 |
vasculature of organ | 5.52e-07 | 11 |