FFCP PHASE1:Hg19::chr7:73536642..73536645,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:73536642..73536645,+ | |||
|id=chr7:73536642..73536645,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002601;2.04e-08;1!CL:0002568;5.39e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,1.91e-08,1;CL:0000047,3.57e-08,8;CL:0002568,9.29e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.39e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.82e-10;3!DOID:127;7.82e-10;3!DOID:3347;5.39e-08;1!DOID:0060072;1.39e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.00e-10,3;DOID:127,6.00e-10,3;DOID:3347,6.63e-08,1;DOID:0060072,1.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.55e-07!86;UBERON:0000073!5.68e-07!94;UBERON:0001016!5.68e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;5.39e-08;1!UBERON:0009661;5.39e-08;1!UBERON:0002950;5.39e-08;1!UBERON:0001891;5.39e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.06e-07,1;UBERON:0009661,1.06e-07,1;UBERON:0002950,1.06e-07,1;UBERON:0001891,1.06e-07,1;UBERON:0009616,1.06e-07,1;UBERON:0010286,1.06e-07,1 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0,0.527533956456907,0,0,0,0,1.46062018077475,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.684372125364421,0,0.229240217243854,0.246301768349837,0.550975469195755,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0.755751887377619,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493313713811028,0.552700035571697,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0.722878304769133,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.130979075497713,0,0,0.324547393654683,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0,0,0,0.300091096084402,0.309157587715317,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,1.45990943630332,0,1.92972281457866,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.329250856225877,0,0,0.370353780634118,0,0,1.44331342025273,0.34779121492523,0.117408694235822,0.721832238805369,0.462985512576611,0.190254152234598,0,0,0,0.936017060556951,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.352193736052904,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.22001485746285,1.16344544182,10.7296933755565,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0.355391948742546,2.37585561880029,0.301439377059586,0,0.199945982364114,0,1.50677127429638,6.32501818449095,0,0,0,0.289562613335158,0.410952645100767,0.179060963239896,0.112085143993527,0,0.215627574859517,0,2.28685161800217,0,1.54657762555539,1.17261385734044,0,0.749007023947182,0,0,0.12269149171914,1.00034104211935,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0.496215615637554,0.153461973288062,0,0.384417447767103,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0.328508624055237,0,1.39452454151951,0.120859449591622,0,0.0920809889358963,0,0.546273504020151,0.393373244878272,0,0.231046011313244,1.56869953835371,0,0.316654886678627,0,0.340187410553031,0.431831832204279,0,0.812839312631559,0,0.254876273045038,0,0,0,0,0.512900250232778,0.328014645699706,0.976135183992909,0,0,0.247528499761764,0,0,0,0.580024309752732,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.623224249527161,0,0.192190067365106,0.382838137483752,0.2023155617111,1.39453664789186,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0.687743287091848,0,2.48332744849418,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.284567373393656,0.318852545457645,0.199579371432817,0,0.635020748171649,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906,0.329607748453519,0.211125408127993,0.398495976502139,0,0,0.613612095012929,0.246169610922139,0.311039587661807,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0.689486746482929,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0.227884111694002,0.23056390438806,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.247127877893006,0.313265848516366,0,0.802577647298789,1.40558667435203,0.364909578431332,0,0.242780379534093,0,0,0.30607276163049,0,0,0.207376382794494,0,0,0,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.19351266257817,0.0730893170861856,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.160317640503067,0,0,0.144090417154106,0,0,0.288109595976299,0,0,0.407712618220842,0.627617077873999,0.815985741090574,0,0,0.136905378891993,0,0.429765441419957,0,0,0.458320848023367,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.492137407573744,0.0846733320657845,0,0.408610218334727,0.321506296930038,0.137539436597234,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0.542999601753713,1.72844298240254,1.30634944043764,0,0,0.511164065356265,0.113312091520126,0,0,0.258565912723101,1.05786081394152,0,0,0,0,0,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0.157054096250234,0.886068179966986,1.95242023843141,0.876336514945499,0,0.110929051536852,0.124192805882767,0,0.124980407962107,0.303298235083296,1.42732666772484,0,1.40500471742064,0.28984205722165,0.298509605773748,0.233713309847224,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.295710299979268,0,0,0.155262956876259,0,0.53168342911599,1.5652351854352,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0,0.553033744606923,0,0,0.163565394255844,0,0,0.211312123358627,0,0.213383459388282,0,0,0.184105950251841,0,0,0,0.107824811396682,0.314531883711793,0.109209638192014,0.33946505990805,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.798169295285756,0.205116364240755,0,0,0.322951291263702,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.462102664601353,0,1.3807198521202,0,0.0752103283492573,0,0.781514011233092,0,0.163771917510097,0,0.405225507710368,0,1.2401207790071,0.380494861163441,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0.236387681767936,0.222462803784138,0,0.314231179832004,0,0,0.647782773655864,0,0,0,0.116241425368125,0.173858272302579,0.801711364730253,0,0,0,0,0.118332000730565,0.511280428554946,0.423387050190929,0,0.93061915699296,0.955538938977433,0,0.392600934460972,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0.169927114687817,0.0939839179798536,0.128915775947154,0.199882311849858,0,0,0.240724100067505,0,0,1.00337708206016,0,0.271965960763659,0.436350690340377,0,0.743990036333503,0.462175628631418,0,0.126166424835079,0.327796715891087,0.380095503034311,0,0,0,0.250707539292375,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.224263725161227,0.12729431655633,0,0.217716747896961,0,0.134704106029175,0,0,0.244209805832924,0.106727345877715,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr7:73536642..73536645,+ | |||
}} |
Revision as of 17:23, 22 January 2014
Short description: | p@chr7:73536642..73536645, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:73536642..73536645, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 1.91e-08 | 1 |
neuronal stem cell | 3.57e-08 | 8 |
mesenchymal stem cell of Wharton's jelly | 9.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.06e-07 | 1 |
midbrain nucleus | 1.06e-07 | 1 |
regional part of midbrain | 1.06e-07 | 1 |
midbrain | 1.06e-07 | 1 |
presumptive midbrain | 1.06e-07 | 1 |
midbrain neural tube | 1.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.00e-10 | 3 |
leiomyoma | 6.00e-10 | 3 |
osteosarcoma | 6.63e-08 | 1 |
benign neoplasm | 1.14e-07 | 4 |