FFCP PHASE1:Hg19::chr7:134331597..134331615,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=669 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1093 | |||
|TSSclassifier=strong | |||
|UniProt=P07738 | |||
|association_with_transcript=14bp_to_ENST00000393132_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_BPGM_5end | |||
|id=chr7:134331597..134331615,+ | |||
|ontology_enrichment_celltype=CL:0002371!9.92e-10!591;CL:0000723!1.07e-08!436;CL:0000048!1.29e-08!430;CL:0000034!4.21e-08!444;CL:0000144!1.02e-07!625;CL:0000003!6.51e-07!722;CL:0000359!9.09e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.43e-07;33!CL:0002057;1.43e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.80e-09,433;CL:0000048,7.05e-09,427;CL:0000034,2.36e-08,441;CL:0000359,9.03e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!3.49e-10!42;UBERON:0003509!3.49e-10!42;UBERON:0004572!3.49e-10!42;UBERON:0004535!1.59e-08!110;UBERON:0003081!1.88e-08!216;UBERON:0004573!3.10e-08!33;UBERON:0004571!3.10e-08!33;UBERON:0000178!4.30e-08!15;UBERON:0000179!4.30e-08!15;UBERON:0000463!4.30e-08!15;UBERON:0001009!1.40e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.05e-08;15!UBERON:0000179;4.05e-08;15!UBERON:0000463;4.05e-08;15!UBERON:0001637;9.65e-08;42!UBERON:0003509;9.65e-08;42!UBERON:0004572;9.65e-08;42!UBERON:0004573;1.66e-07;33!UBERON:0004571;1.66e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.45e-10,42;UBERON:0003509,3.45e-10,42;UBERON:0004572,3.45e-10,42;UBERON:0003081,2.35e-09,203;UBERON:0004535,1.95e-08,109;UBERON:0004573,3.08e-08,33;UBERON:0004571,3.08e-08,33;UBERON:0000178,4.26e-08,15;UBERON:0000179,4.26e-08,15;UBERON:0000463,4.26e-08,15;UBERON:0000926,1.28e-07,315;UBERON:0004120,1.28e-07,315;UBERON:0006603,1.28e-07,315;UBERON:0001009,1.71e-07,112 | |||
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| |||
|short_description=p1@BPGM | |||
}} |
Revision as of 19:26, 22 January 2014
Short description: | p1@BPGM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BPGM_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 14bp_to_ENST00000393132_5end |
EntrezGene: | BPGM |
HGNC: | 1093 |
UniProt: | P07738 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.80e-09 | 433 |
multi fate stem cell | 7.05e-09 | 427 |
stem cell | 2.36e-08 | 441 |
vascular associated smooth muscle cell | 9.03e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
artery | 3.45e-10 | 42 |
arterial blood vessel | 3.45e-10 | 42 |
arterial system | 3.45e-10 | 42 |
lateral plate mesoderm | 2.35e-09 | 203 |
cardiovascular system | 1.95e-08 | 109 |
systemic artery | 3.08e-08 | 33 |
systemic arterial system | 3.08e-08 | 33 |
blood | 4.26e-08 | 15 |
haemolymphatic fluid | 4.26e-08 | 15 |
organism substance | 4.26e-08 | 15 |
mesoderm | 1.28e-07 | 315 |
mesoderm-derived structure | 1.28e-07 | 315 |
presumptive mesoderm | 1.28e-07 | 315 |
circulatory system | 1.71e-07 | 112 |