FFCP PHASE1:Hg19::chr9:16477370..16477375,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr9:16477370..16477375,- | |||
|id=chr9:16477370..16477375,- | |||
|ontology_enrichment_celltype=CL:0000594!1.26e-07!3;CL:0002504!1.37e-07!3;CL:1000279!1.37e-07!3;CL:1000280!1.37e-07!3;CL:0000064!3.23e-07!3;CL:0005012!3.23e-07!3;CL:0000067!3.23e-07!3;CL:0002304!3.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002504;1.71e-14;3!CL:1000279;1.71e-14;3!CL:0002590;1.71e-14;3!CL:1000280;1.71e-14;3!CL:0000306;3.26e-11;4!CL:0002222;3.26e-11;4!CL:0002224;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,1.83e-14,3;CL:0002504,2.09e-14,3;CL:1000279,2.09e-14,3;CL:1000280,2.09e-14,3;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!3.23e-07!3;UBERON:0001775!3.23e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.81e-40;1!UBERON:0003831;1.81e-40;1!UBERON:0003898;1.81e-40;1!UBERON:0004830;1.81e-40;1!UBERON:0003830;1.81e-40;1!UBERON:0005175;1.81e-40;1!UBERON:0001774;1.81e-40;1!UBERON:0001103;1.81e-40;1!UBERON:0005090;5.15e-21;2!UBERON:0001630;5.15e-21;2!UBERON:0010077;3.26e-11;4!UBERON:0005389;3.26e-11;4!UBERON:0000484;3.26e-11;4!UBERON:0000965;3.26e-11;4!UBERON:0001803;3.26e-11;4!UBERON:0005284;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,9.91e-41,1;UBERON:0003831,9.91e-41,1;UBERON:0003898,9.91e-41,1;UBERON:0004830,9.91e-41,1;UBERON:0003830,9.91e-41,1;UBERON:0005175,9.91e-41,1;UBERON:0001774,9.91e-41,1;UBERON:0001103,9.91e-41,1;UBERON:0010084,9.91e-41,1;UBERON:0005090,3.81e-21,2;UBERON:0001630,3.81e-21,2;UBERON:0010077,3.10e-11,4;UBERON:0005389,3.10e-11,4;UBERON:0000484,3.10e-11,4;UBERON:0002546,3.10e-11,4;UBERON:0000965,3.10e-11,4;UBERON:0001803,3.10e-11,4;UBERON:0003073,3.10e-11,4;UBERON:0005426,3.10e-11,4;UBERON:0005284,3.22e-09,5 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.429680979473094,0.580066775656914,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0,0.38126038784765,0,0,0,0,0.359744915166629,1.09814811894422,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,5.70038601945582,0,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0.19566461893209,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.453692771289717,0.310874401165561,0,0.159296767163702,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0.181848659202559,0,0.928067519756987,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0.215927591218621,0,0,0,0.116241425368125,0.173858272302579,0.801711364730253,0,0,0,0,0.354996002191696,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr9:16477370..16477375,- | |||
}} |
Revision as of 00:56, 23 January 2014
Short description: | p@chr9:16477370..16477375, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr9:16477370..16477375, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 1.83e-14 | 3 |
enteric smooth muscle cell | 2.09e-14 | 3 |
smooth muscle cell of large intestine | 2.09e-14 | 3 |
smooth muscle cell of colon | 2.09e-14 | 3 |
crystallin accumulating cell | 3.10e-11 | 4 |
vertebrate lens cell | 3.10e-11 | 4 |
lens epithelial cell | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 9.91e-41 | 1 |
respiratory system muscle | 9.91e-41 | 1 |
skeletal muscle of trunk | 9.91e-41 | 1 |
respiratory system skeletal muscle | 9.91e-41 | 1 |
thoracic segment muscle | 9.91e-41 | 1 |
chest organ | 9.91e-41 | 1 |
muscle of trunk | 9.91e-41 | 1 |
diaphragm | 9.91e-41 | 1 |
future diaphragm | 9.91e-41 | 1 |
muscle structure | 3.81e-21 | 2 |
muscle organ | 3.81e-21 | 2 |
cuboidal epithelium | 3.10e-11 | 4 |
transparent eye structure | 3.10e-11 | 4 |
simple cuboidal epithelium | 3.10e-11 | 4 |
cranial placode | 3.10e-11 | 4 |
lens of camera-type eye | 3.10e-11 | 4 |
epithelium of lens | 3.10e-11 | 4 |
lens placode | 3.10e-11 | 4 |
lens vesicle | 3.10e-11 | 4 |
brain vasculature | 3.22e-09 | 5 |