FFCP PHASE1:Hg19::chr9:125231360..125231383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26740 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8209 | |||
|TSSclassifier=strong | |||
|UniProt=B3KVN8 | |||
|association_with_transcript=0bp_to_AK123016_5end | |||
|description=CAGE_peak_1_at_OR1J2_5end | |||
|id=chr9:125231360..125231383,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.91e-19!75;CL:0002620!2.15e-16!23;CL:0002334!1.30e-11!12;CL:0000055!6.27e-10!180;CL:0000048!1.30e-07!430;CL:0000569!1.61e-07!4;CL:0000011!1.61e-07!4;CL:0000723!3.11e-07!436;CL:0000134!7.58e-07!358;CL:0000034!9.46e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.45e-16;23!CL:0002570;4.23e-15;8!CL:0000048;4.35e-11;58!CL:0000134;8.27e-10;55!CL:0000723;9.53e-10;61!CL:0000034;1.46e-08;69!CL:0000135;1.87e-07;3!CL:0000388;1.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.79e-16,23;CL:0002570,3.05e-15,8;CL:0000135,1.64e-07,3;CL:0000388,1.64e-07,3;CL:0000057,5.41e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.74e-14!14;DOID:17!1.72e-09!5;DOID:450!1.72e-09!5;DOID:66!1.72e-09!5;DOID:423!1.72e-09!5;DOID:0080000!1.72e-09!5;DOID:11722!1.72e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.04e-21;14!DOID:120;1.19e-10;27!DOID:193;7.88e-10;29!DOID:17;1.09e-09;5!DOID:450;1.09e-09;5!DOID:66;1.09e-09;5!DOID:423;1.09e-09;5!DOID:0080000;1.09e-09;5!DOID:11722;1.09e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.12e-21,14;DOID:120,1.23e-10,27;DOID:193,8.14e-10,29;DOID:17,1.05e-09,5;DOID:450,1.05e-09,5;DOID:66,1.05e-09,5;DOID:423,1.05e-09,5;DOID:0080000,1.05e-09,5;DOID:11722,1.05e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002619!4.29e-14!22;UBERON:0002199!4.34e-14!45;UBERON:0002416!4.34e-14!45;UBERON:0001950!9.01e-14!20;UBERON:0000956!5.77e-12!25;UBERON:0000203!5.77e-12!25;UBERON:0001893!2.09e-11!34;UBERON:0001869!4.03e-11!32;UBERON:0002097!7.49e-11!40;UBERON:0000200!1.25e-10!6;UBERON:0002791!2.00e-10!33;UBERON:0002118!1.55e-09!5;UBERON:0004532!1.55e-09!5;UBERON:0002020!6.85e-09!34;UBERON:0003528!6.85e-09!34;UBERON:0003102!7.26e-09!95;UBERON:0002780!1.10e-08!41;UBERON:0001890!1.10e-08!41;UBERON:0006240!1.10e-08!41;UBERON:0003080!2.25e-08!42;UBERON:0000992!3.66e-08!13;UBERON:0000475!4.94e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.92e-13;13!UBERON:0000200;8.81e-13;6!UBERON:0002119;1.11e-11;4!UBERON:0001950;1.89e-10;20!UBERON:0002702;2.09e-10;2!UBERON:0002118;6.89e-10;5!UBERON:0002619;1.83e-09;22!UBERON:0001872;2.37e-09;5!UBERON:0001013;1.59e-08;14!UBERON:0000956;2.87e-08;25!UBERON:0000203;2.87e-08;25!UBERON:0000991;4.38e-08;21!UBERON:0007846;1.87e-07;3!UBERON:0000043;1.87e-07;3!UBERON:0007845;1.87e-07;3!UBERON:0001870;3.23e-07;3!UBERON:0002097;5.54e-07;41!UBERON:0002199;5.82e-07;46!UBERON:0002416;5.82e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.72e-13,13;UBERON:0000200,9.39e-13,6;UBERON:0002119,1.03e-11,4;UBERON:0002702,1.99e-10,2;UBERON:0001950,2.01e-10,20;UBERON:0002118,6.31e-10,5;UBERON:0002619,1.94e-09,22;UBERON:0001872,2.82e-09,5;UBERON:0002199,5.47e-09,46;UBERON:0002416,5.47e-09,46;UBERON:0001013,1.33e-08,14;UBERON:0002097,2.27e-08,41;UBERON:0000956,3.02e-08,25;UBERON:0000203,3.02e-08,25;UBERON:0000991,4.10e-08,21;UBERON:0009196,4.10e-08,21;UBERON:0009117,4.10e-08,21;UBERON:0005564,4.10e-08,21;UBERON:0004176,1.02e-07,22;UBERON:0007846,1.64e-07,3;UBERON:0000043,1.64e-07,3;UBERON:0007845,1.64e-07,3;UBERON:0001870,3.14e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0.286836620748814,0,0,0,0,0,0,0,0,0,0,4.05808099879417,0,0.597794722207204,0,0,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0.989067717114227,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0.717558542755448,2.56268866582281,3.60284231971255,0.900273288253207,4.74041634496819,4.89517026086695,1.48893485065272,0.675105328965065,1.16924406193438,4.29137416214995,10.4936884452221,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,3.82287903659565,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0.768834895534206,0.511707249066704,0.321707842287215,0,0.308419387605311,1.59805552781814,0.328508624055237,0,0.464841513839837,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.929691098594572,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0.141405431953713,0,0,0,2.63070531152258,0,0,0.202910376962704,0,0,0,0,0,1.06428319221179,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12020043105367,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.58634144372552,1.1267183763585,0,0,0,0,0,0,0,0,0,0,1.64180283175561,7.94625253480563,1.66441758450784,0.568209015825267,2.0125432140206,4.44905610798268,13.0438838986246,1.81477108515887,0.310874401165561,0.591420599958536,1.11507737014592,11.2450778040901,1.86315548251511,0,1.06336685823198,4.69570555630561,0.150257608997218,0,0.406870733204662,5.45545977607678,0.966695013382396,6.49647263829891,2.78667122089031,0,1.71697852591396,2.69399591012735,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0.128458450192919,5.6678630530234,0.638535436228605,0,0,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,2.34323429584154,2.06686796501184,0.951237152908602,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24968269769413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.951880862672806,0,0,0.743990036333503,3.23522940041993,1.73050624849516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@OR1J2 | |||
}} |
Revision as of 03:11, 23 January 2014
Short description: | p1@OR1J2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OR1J2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK123016_5end |
EntrezGene: | OR1J2 |
HGNC: | 8209 |
UniProt: | B3KVN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.79e-16 | 23 |
mesenchymal stem cell of adipose | 3.05e-15 | 8 |
fibrocyte | 1.64e-07 | 3 |
tendon cell | 1.64e-07 | 3 |
fibroblast | 5.41e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.72e-13 | 13 |
gyrus | 9.39e-13 | 6 |
left ovary | 1.03e-11 | 4 |
middle frontal gyrus | 1.99e-10 | 2 |
neocortex | 2.01e-10 | 20 |
right ovary | 6.31e-10 | 5 |
regional part of cerebral cortex | 1.94e-09 | 22 |
parietal lobe | 2.82e-09 | 5 |
integument | 5.47e-09 | 46 |
integumental system | 5.47e-09 | 46 |
adipose tissue | 1.33e-08 | 14 |
skin of body | 2.27e-08 | 41 |
cerebral cortex | 3.02e-08 | 25 |
pallium | 3.02e-08 | 25 |
gonad | 4.10e-08 | 21 |
indifferent external genitalia | 4.10e-08 | 21 |
indifferent gonad | 4.10e-08 | 21 |
gonad primordium | 4.10e-08 | 21 |
external genitalia | 1.02e-07 | 22 |
dense regular connective tissue | 1.64e-07 | 3 |
tendon | 1.64e-07 | 3 |
regular connective tissue | 1.64e-07 | 3 |
frontal cortex | 3.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.12e-21 | 14 |
female reproductive organ cancer | 1.23e-10 | 27 |
reproductive organ cancer | 8.14e-10 | 29 |
musculoskeletal system disease | 1.05e-09 | 5 |
myotonic disease | 1.05e-09 | 5 |
muscle tissue disease | 1.05e-09 | 5 |
myopathy | 1.05e-09 | 5 |
muscular disease | 1.05e-09 | 5 |
myotonic dystrophy | 1.05e-09 | 5 |