FFCP PHASE1:Hg19::chrX:69643029..69643035,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25974 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCC8 | |||
|association_with_transcript=38bp_to_ENST00000374382,uc004dyh.2,uc010nkx.1,uc010nky.1,uc011mpk.1,uc011mpl.1,uc011mpm.1_5end | |||
|coexpression_cluster_id=C4878 | |||
|description=CAGE_peak_6_at_GDPD2_5end | |||
|id=chrX:69643029..69643035,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.19e-21!5;CL:0000047!1.91e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.66e-21;5!CL:0002321;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.15e-21,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.78e-15;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.05e-47!86;UBERON:0001049!1.11e-47!57;UBERON:0005068!1.11e-47!57;UBERON:0006241!1.11e-47!57;UBERON:0007135!1.11e-47!57;UBERON:0001017!2.38e-47!82;UBERON:0000073!1.76e-42!94;UBERON:0001016!1.76e-42!94;UBERON:0003075!2.61e-39!86;UBERON:0007284!2.61e-39!86;UBERON:0002616!4.65e-39!59;UBERON:0002020!1.05e-37!34;UBERON:0003528!1.05e-37!34;UBERON:0002346!3.14e-37!90;UBERON:0002791!5.62e-35!33;UBERON:0000955!1.46e-34!69;UBERON:0006238!1.46e-34!69;UBERON:0002780!3.13e-34!41;UBERON:0001890!3.13e-34!41;UBERON:0006240!3.13e-34!41;UBERON:0001893!7.65e-34!34;UBERON:0003080!2.60e-33!42;UBERON:0003056!7.66e-29!61;UBERON:0001869!1.96e-28!32;UBERON:0004121!3.81e-23!169;UBERON:0000033!5.38e-23!123;UBERON:0000924!2.03e-22!173;UBERON:0006601!2.03e-22!173;UBERON:0007023!4.00e-22!115;UBERON:0000153!1.37e-21!129;UBERON:0007811!1.37e-21!129;UBERON:0000956!2.33e-21!25;UBERON:0000203!2.33e-21!25;UBERON:0002308!1.39e-19!9;UBERON:0000125!1.39e-19!9;UBERON:0002619!2.44e-17!22;UBERON:0001950!1.00e-15!20;UBERON:0003076!3.50e-15!15;UBERON:0003057!3.50e-15!15;UBERON:0002420!1.86e-14!9;UBERON:0007245!1.86e-14!9;UBERON:0010009!1.86e-14!9;UBERON:0010011!1.86e-14!9;UBERON:0000454!1.86e-14!9;UBERON:0009663!4.45e-13!7;UBERON:0006331!3.50e-12!3;UBERON:0000988!6.69e-12!3;UBERON:0002298!9.25e-12!8;UBERON:0004733!6.82e-11!12;UBERON:0002028!6.82e-11!12;UBERON:0007277!6.82e-11!12;UBERON:0002680!2.74e-10!9;UBERON:0001895!2.74e-10!9;UBERON:0010092!2.74e-10!9;UBERON:0004732!5.26e-10!13;UBERON:0000025!2.67e-09!194;UBERON:0000369!7.19e-09!4;UBERON:0002435!7.19e-09!4;UBERON:0000204!7.19e-09!4;UBERON:0010082!7.19e-09!4;UBERON:0002148!8.85e-09!2;UBERON:0009662!8.85e-09!2;UBERON:0000064!3.22e-08!219;UBERON:0001871!1.16e-07!7;UBERON:0000349!2.36e-07!5;UBERON:0001872!4.01e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.04e-34;3!UBERON:0004177;4.66e-21;5!UBERON:0005057;4.66e-21;5!UBERON:0002075;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.27e-34,3;UBERON:0004854,4.27e-34,3;UBERON:0009034,4.27e-34,3;UBERON:0002095,4.27e-34,3;UBERON:0004782,4.27e-34,3;UBERON:0003281,4.27e-34,3;UBERON:0009664,4.27e-34,3;UBERON:0002296,4.27e-34,3;UBERON:0005602,4.27e-34,3;UBERON:0001179,4.27e-34,3;UBERON:0006293,4.27e-34,3;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12;UBERON:0003887,1.22e-09,12;UBERON:0002075,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,1.19276791489337,0.929551542956147,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.687697182986169,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.751871343838829,1.48253142339228,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@GDPD2 | |||
}} |
Revision as of 05:58, 23 January 2014
Short description: | p6@GDPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GDPD2_5end |
Coexpression cluster: | C4878_spleen_H9_HES3GFP_iPS_hippocampus_spinal_Neural |
Association with transcript: | 38bp_to_ENST00000374382, uc004dyh.2, uc010nkx.1, uc010nky.1, uc011mpk.1, uc011mpl.1, uc011mpm.1_5end |
EntrezGene: | GDPD2 |
HGNC: | 25974 |
UniProt: | Q9HCC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.27e-34 | 3 |
gastrointestinal system mesentery | 4.27e-34 | 3 |
stomach region | 4.27e-34 | 3 |
mesentery | 4.27e-34 | 3 |
gastrointestinal system serosa | 4.27e-34 | 3 |
mesentery of stomach | 4.27e-34 | 3 |
gut mesentery | 4.27e-34 | 3 |
dorsal mesentery | 4.27e-34 | 3 |
dorsal mesogastrium | 4.27e-34 | 3 |
peritoneal cavity | 4.27e-34 | 3 |
spleen primordium | 4.27e-34 | 3 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
intraembryonic coelom | 1.22e-09 | 12 |
viscus | 7.18e-07 | 18 |