FFCP PHASE1:Hg19::chr10:115441699..115441705,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:115441699..115441705,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:115441699..115441705,- | |description=CAGE_peak_at_chr10:115441699..115441705,- | ||
|id=chr10:115441699..115441705,- | |id=chr10:115441699..115441705,- | ||
|ontology_enrichment_celltype=CL:0000738!7.05e-58!140;CL:0000037!3.53e-45!172;CL:0000566!3.53e-45!172;CL:0002087!5.34e-45!119;CL:0002031!2.18e-42!124;CL:0000988!4.05e-42!182;CL:0002032!7.23e-39!165;CL:0000837!7.23e-39!165;CL:0002057!1.30e-27!42;CL:0000766!4.16e-26!76;CL:0002393!4.35e-26!9;CL:0002397!4.35e-26!9;CL:0000860!1.92e-25!45;CL:0000557!1.29e-23!71;CL:0002009!6.42e-22!65;CL:0000839!8.53e-22!70;CL:0002194!1.67e-20!63;CL:0000576!1.67e-20!63;CL:0000040!1.67e-20!63;CL:0000559!1.67e-20!63;CL:0000763!2.72e-20!112;CL:0000049!2.72e-20!112;CL:0000838!3.72e-18!52;CL:0000542!9.92e-18!53;CL:0000051!9.92e-18!53;CL:0000134!4.17e-16!358;CL:0002320!1.38e-15!365;CL:0000219!9.36e-14!390;CL:0000623!1.51e-12!3;CL:0000825!1.51e-12!3;CL:0000842!2.20e-12!3;CL:0000767!2.97e-12!3;CL:0000048!1.45e-11!430;CL:0000723!2.98e-11!436;CL:0000451!3.04e-11!10;CL:0000034!7.52e-11!444;CL:0000990!8.14e-10!8;CL:0000224!2.18e-09!4;CL:0000791!5.67e-09!18;CL:0000789!5.67e-09!18;CL:0002420!5.67e-09!18;CL:0002419!5.67e-09!18;CL:0000790!5.67e-09!18;CL:0000084!5.87e-08!25;CL:0000827!5.87e-08!25;CL:0000453!5.54e-07!5 | |ontology_enrichment_celltype=CL:0000738!7.05e-58!140;CL:0000037!3.53e-45!172;CL:0000566!3.53e-45!172;CL:0002087!5.34e-45!119;CL:0002031!2.18e-42!124;CL:0000988!4.05e-42!182;CL:0002032!7.23e-39!165;CL:0000837!7.23e-39!165;CL:0002057!1.30e-27!42;CL:0000766!4.16e-26!76;CL:0002393!4.35e-26!9;CL:0002397!4.35e-26!9;CL:0000860!1.92e-25!45;CL:0000557!1.29e-23!71;CL:0002009!6.42e-22!65;CL:0000839!8.53e-22!70;CL:0002194!1.67e-20!63;CL:0000576!1.67e-20!63;CL:0000040!1.67e-20!63;CL:0000559!1.67e-20!63;CL:0000763!2.72e-20!112;CL:0000049!2.72e-20!112;CL:0000838!3.72e-18!52;CL:0000542!9.92e-18!53;CL:0000051!9.92e-18!53;CL:0000134!4.17e-16!358;CL:0002320!1.38e-15!365;CL:0000219!9.36e-14!390;CL:0000623!1.51e-12!3;CL:0000825!1.51e-12!3;CL:0000842!2.20e-12!3;CL:0000767!2.97e-12!3;CL:0000048!1.45e-11!430;CL:0000723!2.98e-11!436;CL:0000451!3.04e-11!10;CL:0000034!7.52e-11!444;CL:0000990!8.14e-10!8;CL:0000224!2.18e-09!4;CL:0000791!5.67e-09!18;CL:0000789!5.67e-09!18;CL:0002420!5.67e-09!18;CL:0002419!5.67e-09!18;CL:0000790!5.67e-09!18;CL:0000084!5.87e-08!25;CL:0000827!5.87e-08!25;CL:0000453!5.54e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002393;6.65e-45;6!CL:0002397;6.65e-45;6!CL:0000623;4.60e-23;3!CL:0000226;7.60e-23;3!CL:0000842;7.60e-23;3!CL:0000576;1.84e-08;48!CL:0002087;3.67e-08;104!CL:0000766;3.02e-07;69!CL:0000767;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.06e-30,9;CL:0002397,4.06e-30,9;CL:0000623,4.61e-23,3;CL:0000825,4.61e-23,3;CL:0000226,8.04e-23,3;CL:0000842,8.04e-23,3;CL:0000738,1.60e-16,136;CL:0002087,2.12e-16,115;CL:0000860,4.69e-14,42;CL:0002057,4.69e-14,42;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0000473,2.81e-12,48;CL:0000234,2.81e-12,48;CL:0000766,9.12e-11,72;CL:0002031,2.13e-10,120;CL:0002194,8.80e-10,59;CL:0000576,8.80e-10,59;CL:0000040,8.80e-10,59;CL:0000559,8.80e-10,59;CL:0002009,1.85e-09,61;CL:0002032,1.99e-09,161;CL:0000837,1.99e-09,161;CL:0000839,9.79e-09,66;CL:0000557,1.33e-08,67;CL:0000763,4.64e-07,108;CL:0000049,4.64e-07,108;CL:0000767,7.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.22e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.24e-23!102;UBERON:0003061!5.24e-23!102;UBERON:0002193!2.53e-20!112;UBERON:0002371!2.61e-20!80;UBERON:0001474!1.73e-18!86;UBERON:0002405!6.12e-15!115;UBERON:0004765!6.91e-15!101;UBERON:0001434!6.91e-15!101;UBERON:0002384!7.06e-15!375;UBERON:0003081!5.37e-08!216;UBERON:0002204!7.83e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.83e-10,98;UBERON:0003061,3.83e-10,98;UBERON:0002193,3.72e-09,108;UBERON:0002371,1.44e-07,76;UBERON:0001474,5.31e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.157421562627358,2.36018566109342,0.767658796194425,0.619264493264304,0,0,0,0,0,0,13.2958898047651,7.01905566145496,5.4252717678963,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,1.18241114944293,0,0.645484683583826,1.35426486594342,0,0,0,0.918251677112708,0.962787081228281,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.949387162322653,0.422510572623884,2.33864729961548,0.419317291016752,0,0,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,1.41124720257313,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,2.15627574859517,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.15714200818617,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.157421562627358,2.36018566109342,0.767658796194425,0.619264493264304,0,0,0,0,0,0,13.2958898047651,7.01905566145496,5.4252717678963,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,1.18241114944293,0,0.645484683583826,1.35426486594342,0,0,0,0.918251677112708,0.962787081228281,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.949387162322653,0.422510572623884,2.33864729961548,0.419317291016752,0,0,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,1.41124720257313,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75843064282698,2.15627574859517,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,2.15714200818617,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:115441699..115441705,- | |short_description=p@chr10:115441699..115441705,- | ||
}} | }} |
Latest revision as of 10:36, 23 July 2015
Short description: | p@chr10:115441699..115441705, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:115441699..115441705, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.06e-30 | 9 |
CD14-positive, CD16-positive monocyte | 4.06e-30 | 9 |
natural killer cell | 4.61e-23 | 3 |
pro-NK cell | 4.61e-23 | 3 |
single nucleate cell | 8.04e-23 | 3 |
mononuclear cell | 8.04e-23 | 3 |
leukocyte | 1.60e-16 | 136 |
nongranular leukocyte | 2.12e-16 | 115 |
classical monocyte | 4.69e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.69e-14 | 42 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
defensive cell | 2.81e-12 | 48 |
phagocyte | 2.81e-12 | 48 |
myeloid leukocyte | 9.12e-11 | 72 |
hematopoietic lineage restricted progenitor cell | 2.13e-10 | 120 |
monopoietic cell | 8.80e-10 | 59 |
monocyte | 8.80e-10 | 59 |
monoblast | 8.80e-10 | 59 |
promonocyte | 8.80e-10 | 59 |
macrophage dendritic cell progenitor | 1.85e-09 | 61 |
hematopoietic oligopotent progenitor cell | 1.99e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-09 | 161 |
myeloid lineage restricted progenitor cell | 9.79e-09 | 66 |
granulocyte monocyte progenitor cell | 1.33e-08 | 67 |
myeloid cell | 4.64e-07 | 108 |
common myeloid progenitor | 4.64e-07 | 108 |
basophil | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.83e-10 | 98 |
blood island | 3.83e-10 | 98 |
hemolymphoid system | 3.72e-09 | 108 |
bone marrow | 1.44e-07 | 76 |
bone element | 5.31e-07 | 82 |