FFCP PHASE1:Hg19::chr10:123847193..123847204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:123847193..123847204,+ | |||
|coexpression_cluster_id=C2041 | |coexpression_cluster_id=C2041 | ||
|description=CAGE_peak_at_chr10:123847193..123847204,+ | |description=CAGE_peak_at_chr10:123847193..123847204,+ | ||
Latest revision as of 11:09, 23 July 2015
| Short description: | p@chr10:123847193..123847204, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr10:123847193..123847204, + |
| Coexpression cluster: | C2041_cervical_immature_malignant_keratoacanthoma_salivary_nasal_epidermoid |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr10:123847193..123847204+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| acinar cell | 1.62e-15 | 5 |
| protein secreting cell | 4.26e-13 | 6 |
| CD1a-positive Langerhans cell | 1.43e-10 | 2 |
| immature CD1a-positive Langerhans cell | 1.43e-10 | 2 |
| sebum secreting cell | 2.27e-10 | 2 |
| epithelial cell of sweat gland | 2.27e-10 | 2 |
| epithelial cell of skin gland | 2.27e-10 | 2 |
| acinar cell of sebaceous gland | 2.27e-10 | 2 |
| glandular epithelial cell | 4.80e-09 | 9 |
| epidermal cell | 5.87e-09 | 9 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| hindlimb bud | 1.56e-19 | 1 |
| soleus muscle | 1.56e-19 | 1 |
| appendage | 1.56e-19 | 1 |
| lower limb segment | 1.56e-19 | 1 |
| multi-limb segment region | 1.56e-19 | 1 |
| hindlimb muscle | 1.56e-19 | 1 |
| hindlimb zeugopod muscle | 1.56e-19 | 1 |
| paired limb/fin | 1.56e-19 | 1 |
| limb | 1.56e-19 | 1 |
| pelvic appendage | 1.56e-19 | 1 |
Showing 1 to 10 of 43 entries
| Ontology term | p-value | n |
|---|---|---|
| skin squamous cell carcinoma | 5.62e-19 | 1 |
| keratoacanthoma | 5.62e-19 | 1 |
| signet ring cell adenocarcinoma | 3.27e-10 | 2 |
| skin carcinoma | 3.58e-10 | 2 |
| skin cancer | 3.58e-10 | 2 |
| integumentary system cancer | 3.58e-10 | 2 |
Showing 1 to 6 of 6 entries
