FFCP PHASE1:Hg19::chr10:123954618..123954639,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:123954618..123954639,+ | |||
|description=CAGE_peak_at_chr10:123954618..123954639,+ | |description=CAGE_peak_at_chr10:123954618..123954639,+ | ||
|id=chr10:123954618..123954639,+ | |id=chr10:123954618..123954639,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.84e-14;1!CL:0000047;4.53e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.15e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.63e-15;1!UBERON:0010227;7.63e-15;1!UBERON:0007297;7.03e-08;2!UBERON:0008947;1.41e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.40e-20!115;UBERON:0004111!1.87e-08!241;UBERON:0003101!2.73e-08!22;UBERON:0000079!2.73e-08!22;UBERON:0000477!4.70e-08!286;UBERON:0001017!1.76e-07!82;UBERON:0005743!3.45e-07!86;UBERON:0000468!3.61e-07!659;UBERON:0004121!4.62e-07!169;UBERON:0000162!4.67e-07!14;UBERON:0001353!4.67e-07!14;UBERON:0000163!4.67e-07!14;UBERON:0006866!4.67e-07!14;UBERON:0000164!4.67e-07!14;UBERON:0000931!4.67e-07!14;UBERON:0000073!9.48e-07!94;UBERON:0001016!9.48e-07!94;UBERON:0001049!9.55e-07!57;UBERON:0005068!9.55e-07!57;UBERON:0006241!9.55e-07!57;UBERON:0007135!9.55e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!6.40e-20!115;UBERON:0004111!1.87e-08!241;UBERON:0003101!2.73e-08!22;UBERON:0000079!2.73e-08!22;UBERON:0000477!4.70e-08!286;UBERON:0001017!1.76e-07!82;UBERON:0005743!3.45e-07!86;UBERON:0000468!3.61e-07!659;UBERON:0004121!4.62e-07!169;UBERON:0000162!4.67e-07!14;UBERON:0001353!4.67e-07!14;UBERON:0000163!4.67e-07!14;UBERON:0006866!4.67e-07!14;UBERON:0000164!4.67e-07!14;UBERON:0000931!4.67e-07!14;UBERON:0000073!9.48e-07!94;UBERON:0001016!9.48e-07!94;UBERON:0001049!9.55e-07!57;UBERON:0005068!9.55e-07!57;UBERON:0006241!9.55e-07!57;UBERON:0007135!9.55e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;7.63e-15;1!UBERON:0001301;1.84e-14;1!UBERON:0002171;1.84e-14;1!UBERON:0006518;1.84e-14;1!UBERON:0008949;1.84e-14;1!UBERON:0000101;1.84e-14;1!UBERON:0002167;1.84e-14;1!UBERON:0002081;4.53e-08;2!UBERON:0003127;7.03e-08;2!UBERON:0000078;7.03e-08;2!UBERON:0002012;7.03e-08;2!UBERON:0008886;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,9.36e-15,1;UBERON:0002171,1.23e-14,1;UBERON:0006518,1.23e-14,1;UBERON:0008949,1.23e-14,1;UBERON:0000101,1.23e-14,1;UBERON:0002167,1.23e-14,1;UBERON:0001301,1.84e-14,1;UBERON:0002081,5.02e-08,2;UBERON:0010227,5.02e-08,2;UBERON:0003127,6.15e-08,2;UBERON:0000078,9.19e-08,2;UBERON:0007497,9.19e-08,2;UBERON:0003643,9.19e-08,2;UBERON:0003504,9.19e-08,2;UBERON:0003469,9.19e-08,2;UBERON:0003496,9.19e-08,2;UBERON:0002012,9.19e-08,2;UBERON:0008886,9.19e-08,2;UBERON:0007303,9.19e-08,2;UBERON:0002061,9.19e-08,2;UBERON:0005432,9.19e-08,2;UBERON:0004363,9.19e-08,2;UBERON:0007023,9.92e-07,114 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0.795285947051099,0,0,0,0.087834785693126,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.365921118388786,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,2.60279707715243,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,0.362578348774867,0.40101294060657,0.828728900423067,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.721287081534056,0,0.165018999841176,0.574265537996172,0.650060246036521,0,0.290012154876366,0.154048617114644,0,0,0.107420244868274,0,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,2.19762268907841,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.986434056369336,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.241192877250816,3.05163472634166,0.774054819518572,0,0.219385397153973,0,0.557694977114413,0.615602068030377,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0,0.0870592065804026,1.22308667769421,0.171986032471617,0.19351266257817,0.219267951258557,0.0821154570532092,0.387956065953678,0.353024506766001,0,0,0,0.126621591911757,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.114536596165916,0.343189995723929,0,0,1.17847017308398,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0.916641696046735,0.717873024576814,0,0.858452096273142,0,0.268733889946905,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.272406812223151,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0.335434687599266,0.709251365692784,0.209818352539992,0,0,0,2.1440859791201,0,0.25426853765475,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0.513260513652988,0,4.59185874041087,1.25763444079733,1.65695622138878,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.276697269872462,0,0.151649117541648,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0.686791410365586,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,1.8460472781668,0.252071696221718,0.207471757392654,0.161475645631851,0,0.196295437002051,0.11796972334774,0.183428598521679,0,0,0,0,0.601682626794058,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.0634158101939068,0,0,0.992422356778588,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0.682986574053893,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.39246546425257,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0.3414369541879,0,0,0.118332000730565,0,0.423387050190929,0,0.62041277132864,0,0,0.196300467230486,0.121917924982269,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.771741581079447,0,0,0.735444965261716,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0.475940431336403,0,0,0,0,0,0,0,0,0,0.26721740526556,0.551369397209069,0.250707539292375,0.303114792872958,0,0,0.103432995861895,0.852935927603924,0.23806443146374,0.129177819672012,0.124149428591716,0,0.891060215894309,0,0.435433495793923,0,0.0673520530145875,1.29099969706817,0,0.244209805832924,0,0,0.179650404213174,2.34640942403454,0.244482888365733,0,0.665756774185513,0,0 | |phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0.795285947051099,0,0,0,0.087834785693126,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.365921118388786,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,2.60279707715243,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,0.362578348774867,0.40101294060657,0.828728900423067,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.721287081534056,0,0.165018999841176,0.574265537996172,0.650060246036521,0,0.290012154876366,0.154048617114644,0,0,0.107420244868274,0,0,0.178064071293475,0,0.192190067365106,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,2.19762268907841,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.986434056369336,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.241192877250816,3.05163472634166,0.774054819518572,0,0.219385397153973,0,0.557694977114413,0.615602068030377,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0,0.0870592065804026,1.22308667769421,0.171986032471617,0.19351266257817,0.219267951258557,0.0821154570532092,0.387956065953678,0.353024506766001,0,0,0,0.126621591911757,0.391102765469606,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.114536596165916,0.343189995723929,0,0,1.17847017308398,0,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0.916641696046735,0.717873024576814,0,0.858452096273142,0,0.268733889946905,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.272406812223151,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.121499113316049,0.335434687599266,0.709251365692784,0.209818352539992,0,0,0,2.1440859791201,0,0.25426853765475,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0.513260513652988,0,4.59185874041087,1.25763444079733,1.65695622138878,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.276697269872462,0,0.151649117541648,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0.302461847526478,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0.686791410365586,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0,0,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,1.8460472781668,0.252071696221718,0.207471757392654,0.161475645631851,0,0.196295437002051,0.11796972334774,0.183428598521679,0,0,0,0,0.601682626794058,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.0634158101939068,0,0,0.992422356778588,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0.682986574053893,0,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.39246546425257,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0.3414369541879,0,0,0.118332000730565,0,0.423387050190929,0,0.62041277132864,0,0,0.196300467230486,0.121917924982269,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.771741581079447,0,0,0.735444965261716,0,0.196308467114945,0.297046400327086,0.4226557275834,0,0.187967835959707,0.0644578879735772,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0.475940431336403,0,0,0,0,0,0,0,0,0,0.26721740526556,0.551369397209069,0.250707539292375,0.303114792872958,0,0,0.103432995861895,0.852935927603924,0.23806443146374,0.129177819672012,0.124149428591716,0,0.891060215894309,0,0.435433495793923,0,0.0673520530145875,1.29099969706817,0,0.244209805832924,0,0,0.179650404213174,2.34640942403454,0.244482888365733,0,0.665756774185513,0,0 | ||
|short_description=p@chr10:123954618..123954639,+ | |short_description=p@chr10:123954618..123954639,+ | ||
}} | }} |
Latest revision as of 11:11, 23 July 2015
Short description: | p@chr10:123954618..123954639, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123954618..123954639, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.15e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 9.36e-15 | 1 |
lower lobe of right lung | 1.23e-14 | 1 |
right lung lobe | 1.23e-14 | 1 |
lower lobe of lung | 1.23e-14 | 1 |
lobe of lung | 1.23e-14 | 1 |
right lung | 1.23e-14 | 1 |
epididymis | 1.84e-14 | 1 |
cardiac atrium | 5.02e-08 | 2 |
future cardiac atrium | 5.02e-08 | 2 |
open tracheal system trachea | 6.15e-08 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 9.19e-08 | 2 |
developing epithelial placode | 9.19e-08 | 2 |
respiratory system arterial blood vessel | 9.19e-08 | 2 |
respiratory system blood vessel | 9.19e-08 | 2 |
respiratory system artery | 9.19e-08 | 2 |
head blood vessel | 9.19e-08 | 2 |
pulmonary artery | 9.19e-08 | 2 |
pulmonary vascular system | 9.19e-08 | 2 |
pharyngeal vasculature | 9.19e-08 | 2 |
truncus arteriosus | 9.19e-08 | 2 |
aortic sac | 9.19e-08 | 2 |
pharyngeal arch artery | 9.19e-08 | 2 |
adult organism | 9.92e-07 | 114 |