FFCP PHASE1:Hg19::chr10:126840396..126840411,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126840396..126840411,- | |||
|description=CAGE_peak_at_chr10:126840396..126840411,- | |description=CAGE_peak_at_chr10:126840396..126840411,- | ||
|id=chr10:126840396..126840411,- | |id=chr10:126840396..126840411,- | ||
|ontology_enrichment_celltype=CL:0002322!1.61e-21!5;CL:0000623!1.53e-12!3;CL:0000825!1.53e-12!3;CL:0000039!5.63e-10!7;CL:0000586!5.63e-10!7;CL:0000540!3.17e-07!6;CL:0000031!3.17e-07!6;CL:0000404!3.17e-07!6 | |ontology_enrichment_celltype=CL:0002322!1.61e-21!5;CL:0000623!1.53e-12!3;CL:0000825!1.53e-12!3;CL:0000039!5.63e-10!7;CL:0000586!5.63e-10!7;CL:0000540!3.17e-07!6;CL:0000031!3.17e-07!6;CL:0000404!3.17e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.94e-39;5!CL:0000540;1.14e-19;6!CL:0000404;1.14e-19;6!CL:0002321;2.13e-13;15!CL:0000148;1.05e-11;10!CL:0000147;1.61e-08;14!CL:0000039;4.12e-08;7!CL:0000586;4.12e-08;7!CL:0002535;1.99e-07;2 | |ontology_enrichment_celltype_v019=CL:0002322;1.94e-39;5!CL:0000540;1.14e-19;6!CL:0000404;1.14e-19;6!CL:0002321;2.13e-13;15!CL:0000148;1.05e-11;10!CL:0000147;1.61e-08;14!CL:0000039;4.12e-08;7!CL:0000586;4.12e-08;7!CL:0002535;1.99e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.59e-39,5;CL:0000540,1.25e-19,6;CL:0000031,1.25e-19,6;CL:0000404,1.25e-19,6;CL:0000047,6.96e-15,8;CL:0000148,1.09e-11,10;CL:0000541,1.09e-11,10;CL:0000147,1.66e-08,14;CL:0000039,3.98e-08,7;CL:0000586,3.98e-08,7;CL:0002535,2.40e-07,2;CL:0000133,4.87e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.14e-19;6 | |ontology_enrichment_development_v019=CL:0000031;1.14e-19;6 | ||
|ontology_enrichment_disease=DOID:3493!2.53e-09!2 | |ontology_enrichment_disease=DOID:3493!2.53e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;9.86e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;9.86e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.26e-13!8;UBERON:0003135!2.85e-09!11 | |ontology_enrichment_uberon=UBERON:0000473!7.26e-13!8;UBERON:0003135!2.85e-09!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.48e-13;22!UBERON:0000160;2.54e-11;17!UBERON:0002108;6.00e-11;4!UBERON:0004921;9.93e-09;33!UBERON:0000922;4.17e-08;49!UBERON:0006955;1.99e-07;2!UBERON:0004801;1.99e-07;2!UBERON:0000473;3.34e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0005409;1.48e-13;22!UBERON:0000160;2.54e-11;17!UBERON:0002108;6.00e-11;4!UBERON:0004921;9.93e-09;33!UBERON:0000922;4.17e-08;49!UBERON:0006955;1.99e-07;2!UBERON:0004801;1.99e-07;2!UBERON:0000473;3.34e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.55e-12,25;UBERON:0000160,2.58e-11,17;UBERON:0002108,6.80e-11,4;UBERON:0006955,2.40e-07,2;UBERON:0004801,2.40e-07,2;UBERON:0000473,3.24e-07,8 | |||
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| ||
|short_description=p@chr10:126840396..126840411,- | |short_description=p@chr10:126840396..126840411,- | ||
}} | }} |
Latest revision as of 11:25, 23 July 2015
Short description: | p@chr10:126840396..126840411, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126840396..126840411, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.59e-39 | 5 |
neuron | 1.25e-19 | 6 |
neuroblast | 1.25e-19 | 6 |
electrically signaling cell | 1.25e-19 | 6 |
neuronal stem cell | 6.96e-15 | 8 |
melanocyte | 1.09e-11 | 10 |
melanoblast | 1.09e-11 | 10 |
pigment cell | 1.66e-08 | 14 |
germ line cell | 3.98e-08 | 7 |
germ cell | 3.98e-08 | 7 |
epithelial cell of cervix | 2.40e-07 | 2 |
neurectodermal cell | 4.87e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.55e-12 | 25 |
intestine | 2.58e-11 | 17 |
small intestine | 6.80e-11 | 4 |
uterine epithelium | 2.40e-07 | 2 |
cervix epithelium | 2.40e-07 | 2 |
testis | 3.24e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.87e-08 | 2 |