FFCP PHASE1:Hg19::chr10:132011797..132011820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:132011797..132011820,+ | |||
|description=CAGE_peak_at_chr10:132011797..132011820,+ | |description=CAGE_peak_at_chr10:132011797..132011820,+ | ||
|id=chr10:132011797..132011820,+ | |id=chr10:132011797..132011820,+ | ||
|ontology_enrichment_celltype=CL:0002573!2.48e-20!2;CL:0000453!3.35e-12!5;CL:0000054!1.50e-08!2;CL:0000137!1.50e-08!2;CL:0000092!1.50e-08!2;CL:0002253!1.61e-08!2;CL:0000990!3.55e-07!8 | |ontology_enrichment_celltype=CL:0002573!2.48e-20!2;CL:0000453!3.35e-12!5;CL:0000054!1.50e-08!2;CL:0000137!1.50e-08!2;CL:0000092!1.50e-08!2;CL:0002253!1.61e-08!2;CL:0000990!3.55e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002573;3.94e-34;2!CL:0000054;1.00e-13;2!CL:0000137;1.00e-13;2!CL:0002253;1.00e-13;2!CL:0000092;1.00e-13;2!CL:0002563;1.64e-07;4!CL:0000243;7.65e-07;15!CL:0000125;7.65e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,3.94e-34,2;CL:0000054,9.40e-14,2;CL:0000137,9.40e-14,2;CL:0000092,9.40e-14,2;CL:0002253,1.07e-13,2;CL:0002563,1.69e-07,4;CL:0000243,7.65e-07,15;CL:0000125,7.65e-07,15;CL:0000030,7.65e-07,15;CL:0000339,7.65e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.28e-11;10!UBERON:0005564;6.28e-11;10!CL:0000339;7.65e-07;15 | |||
|ontology_enrichment_disease=DOID:0060085!8.63e-16!1;DOID:3165!8.63e-16!1;DOID:0060121!8.63e-16!1;DOID:2438!8.63e-16!1;DOID:4418!8.63e-16!1;DOID:200!1.50e-08!2;DOID:4305!1.50e-08!2 | |ontology_enrichment_disease=DOID:0060085!8.63e-16!1;DOID:3165!8.63e-16!1;DOID:0060121!8.63e-16!1;DOID:2438!8.63e-16!1;DOID:4418!8.63e-16!1;DOID:200!1.50e-08!2;DOID:4305!1.50e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:0060085;5.23e-26;1!DOID:3165;5.23e-26;1!DOID:0060121;5.23e-26;1!DOID:2438;5.23e-26;1!DOID:4418;5.23e-26;1!DOID:200;1.00e-13;2!DOID:4305;1.00e-13;2!DOID:0060072;1.64e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.61e-26,1;DOID:3165,4.61e-26,1;DOID:0060121,4.61e-26,1;DOID:2438,4.61e-26,1;DOID:4418,4.61e-26,1;DOID:200,9.40e-14,2;DOID:4305,9.40e-14,2;DOID:0060072,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001052!3.18e-15!4;UBERON:0001882!3.66e-15!1;UBERON:0005403!3.66e-15!1;UBERON:0004907!2.25e-12!5;UBERON:0001046!3.70e-12!19;UBERON:0001255!2.67e-08!2;UBERON:0001556!2.67e-08!2;UBERON:0000473!3.51e-08!8;UBERON:0000010!2.15e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.07e-13;8!UBERON:0000010;4.18e-12;8!UBERON:0003135;5.06e-10;11!UBERON:0000014;1.64e-07;4!UBERON:0001052;1.64e-07;4!UBERON:0001242;1.64e-07;4!UBERON:0001262;1.64e-07;4!UBERON:0004786;1.64e-07;4!UBERON:0004808;1.64e-07;4!UBERON:0001277;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.94e-13,8;UBERON:0000010,4.18e-12,8;UBERON:0003135,4.83e-10,11;UBERON:0000014,1.59e-07,4;UBERON:0001052,1.69e-07,4;UBERON:0001242,1.69e-07,4;UBERON:0001262,1.69e-07,4;UBERON:0004786,1.69e-07,4;UBERON:0004808,1.69e-07,4;UBERON:0001277,1.69e-07,4 | |||
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|short_description=p@chr10:132011797..132011820,+ | |short_description=p@chr10:132011797..132011820,+ | ||
}} | }} |
Latest revision as of 11:42, 23 July 2015
Short description: | p@chr10:132011797..132011820, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:132011797..132011820, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 3.94e-34 | 2 |
bone matrix secreting cell | 9.40e-14 | 2 |
osteocyte | 9.40e-14 | 2 |
osteoclast | 9.40e-14 | 2 |
epithelial cell of large intestine | 1.07e-13 | 2 |
intestinal epithelial cell | 1.69e-07 | 4 |
glial cell (sensu Vertebrata) | 7.65e-07 | 15 |
glial cell | 7.65e-07 | 15 |
glioblast | 7.65e-07 | 15 |
glioblast (sensu Vertebrata) | 7.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
testis | 1.94e-13 | 8 |
peripheral nervous system | 4.18e-12 | 8 |
male reproductive organ | 4.83e-10 | 11 |
zone of skin | 1.59e-07 | 4 |
rectum | 1.69e-07 | 4 |
intestinal mucosa | 1.69e-07 | 4 |
wall of intestine | 1.69e-07 | 4 |
gastrointestinal system mucosa | 1.69e-07 | 4 |
gastrointestinal system epithelium | 1.69e-07 | 4 |
intestinal epithelium | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.61e-26 | 1 |
skin benign neoplasm | 4.61e-26 | 1 |
integumentary system benign neoplasm | 4.61e-26 | 1 |
dermis tumor | 4.61e-26 | 1 |
cutaneous fibrous histiocytoma | 4.61e-26 | 1 |
giant cell tumor | 9.40e-14 | 2 |
bone giant cell tumor | 9.40e-14 | 2 |
benign neoplasm | 1.59e-07 | 4 |