FFCP PHASE1:Hg19::chr10:24407264..24407270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:24407264..24407270,- | |||
|description=CAGE_peak_at_chr10:24407264..24407270,- | |||
|id=chr10:24407264..24407270,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;7.35e-18;4!CL:0002222;7.35e-18;4!CL:0002224;7.35e-18;4!CL:0000333;1.71e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.35e-18,4;CL:0002222,7.35e-18,4;CL:0002224,7.35e-18,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.59e-12;6!DOID:171;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.74e-12,6;DOID:171,6.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002426!4.33e-07!1;UBERON:0003831!4.33e-07!1;UBERON:0003898!4.33e-07!1;UBERON:0004830!4.33e-07!1;UBERON:0001774!4.33e-07!1;UBERON:0003830!4.33e-07!1;UBERON:0005175!4.33e-07!1;UBERON:0003897!4.33e-07!1;UBERON:0001103!4.33e-07!1;UBERON:0010084!4.33e-07!1;UBERON:0006122!5.43e-07!1;UBERON:0007029!7.60e-07!1;UBERON:0001000!8.97e-07!1;UBERON:0005352!8.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;3.34e-66;1!UBERON:0003831;3.34e-66;1!UBERON:0003898;3.34e-66;1!UBERON:0004830;3.34e-66;1!UBERON:0003830;3.34e-66;1!UBERON:0005175;3.34e-66;1!UBERON:0001774;3.34e-66;1!UBERON:0001103;3.34e-66;1!UBERON:0005090;5.96e-34;2!UBERON:0001630;5.96e-34;2!UBERON:0010077;7.35e-18;4!UBERON:0005389;7.35e-18;4!UBERON:0000484;7.35e-18;4!UBERON:0000965;7.35e-18;4!UBERON:0001803;7.35e-18;4!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0000010;1.16e-08;8!UBERON:0007625;2.32e-07;11!UBERON:0001443;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,2.39e-66,1;UBERON:0003831,2.39e-66,1;UBERON:0003898,2.39e-66,1;UBERON:0004830,2.39e-66,1;UBERON:0003830,2.39e-66,1;UBERON:0005175,2.39e-66,1;UBERON:0001774,2.39e-66,1;UBERON:0001103,2.39e-66,1;UBERON:0010084,2.39e-66,1;UBERON:0005090,5.04e-34,2;UBERON:0001630,5.04e-34,2;UBERON:0010077,7.35e-18,4;UBERON:0005389,7.35e-18,4;UBERON:0000484,7.35e-18,4;UBERON:0002546,7.35e-18,4;UBERON:0000965,7.35e-18,4;UBERON:0001803,7.35e-18,4;UBERON:0003073,7.35e-18,4;UBERON:0005426,7.35e-18,4;UBERON:0000013,1.83e-14,5;UBERON:0002410,1.83e-14,5;UBERON:0000076,1.24e-09,8;UBERON:0000010,1.21e-08,8;UBERON:0007625,2.32e-07,11;UBERON:0001443,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,3.94163376915261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.747511887973863,0.943225830597996,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,2.30209868346573,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:24407264..24407270,- | |||
}} |
Latest revision as of 12:41, 23 July 2015
Short description: | p@chr10:24407264..24407270, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:24407264..24407270, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.35e-18 | 4 |
vertebrate lens cell | 7.35e-18 | 4 |
lens epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 2.39e-66 | 1 |
respiratory system muscle | 2.39e-66 | 1 |
skeletal muscle of trunk | 2.39e-66 | 1 |
respiratory system skeletal muscle | 2.39e-66 | 1 |
thoracic segment muscle | 2.39e-66 | 1 |
chest organ | 2.39e-66 | 1 |
muscle of trunk | 2.39e-66 | 1 |
diaphragm | 2.39e-66 | 1 |
future diaphragm | 2.39e-66 | 1 |
muscle structure | 5.04e-34 | 2 |
muscle organ | 5.04e-34 | 2 |
cuboidal epithelium | 7.35e-18 | 4 |
transparent eye structure | 7.35e-18 | 4 |
simple cuboidal epithelium | 7.35e-18 | 4 |
cranial placode | 7.35e-18 | 4 |
lens of camera-type eye | 7.35e-18 | 4 |
epithelium of lens | 7.35e-18 | 4 |
lens placode | 7.35e-18 | 4 |
lens vesicle | 7.35e-18 | 4 |
sympathetic nervous system | 1.83e-14 | 5 |
autonomic nervous system | 1.83e-14 | 5 |
external ectoderm | 1.24e-09 | 8 |
peripheral nervous system | 1.21e-08 | 8 |
pigment epithelium of eye | 2.32e-07 | 11 |
chest | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.74e-12 | 6 |
neuroectodermal tumor | 6.56e-08 | 10 |