FFCP PHASE1:Hg19::chr10:30305499..30305518,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:30305499..30305518,- | |||
|description=CAGE_peak_at_chr10:30305499..30305518,- | |||
|id=chr10:30305499..30305518,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002138;9.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.86e-08,76;CL:0000136,1.52e-07,15 | |||
|ontology_enrichment_development_v019=CL:0005022;9.42e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-08!115;UBERON:0000475!9.00e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.27e-14;9!UBERON:0000042;7.27e-14;9!UBERON:0003688;4.16e-10;6!UBERON:0002358;4.16e-10;6!UBERON:0003684;4.16e-10;6!UBERON:0001178;4.16e-10;6!UBERON:0002331;7.67e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.16e-10,6;UBERON:0002358,3.16e-10,6;UBERON:0003684,3.16e-10,6;UBERON:0001178,3.16e-10,6;UBERON:0002331,3.25e-10,10;UBERON:0000358,3.25e-10,10;UBERON:0000307,3.25e-10,10;UBERON:0000091,3.25e-10,10;UBERON:0000087,3.25e-10,10;UBERON:0007010,3.25e-10,10;UBERON:0007806,3.25e-10,10;UBERON:0008780,3.25e-10,10;UBERON:0005728,3.25e-10,10;UBERON:0004457,4.86e-10,12;UBERON:0000042,4.86e-10,12 | |||
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| |||
|short_description=p@chr10:30305499..30305518,- | |||
}} |
Latest revision as of 13:05, 23 July 2015
Short description: | p@chr10:30305499..30305518, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30305499..30305518, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.86e-08 | 76 |
fat cell | 1.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.16e-10 | 6 |
peritoneum | 3.16e-10 | 6 |
abdominal cavity | 3.16e-10 | 6 |
visceral peritoneum | 3.16e-10 | 6 |
umbilical cord | 3.25e-10 | 10 |
blastocyst | 3.25e-10 | 10 |
blastula | 3.25e-10 | 10 |
bilaminar disc | 3.25e-10 | 10 |
inner cell mass | 3.25e-10 | 10 |
cleaving embryo | 3.25e-10 | 10 |
connecting stalk | 3.25e-10 | 10 |
inner cell mass derived epiblast | 3.25e-10 | 10 |
extraembryonic mesoderm | 3.25e-10 | 10 |
cavity lining | 4.86e-10 | 12 |
serous membrane | 4.86e-10 | 12 |