FFCP PHASE1:Hg19::chr11:117805926..117805937,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117805926..117805937,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_at_chr11:117805926..117805937,+ | |description=CAGE_peak_at_chr11:117805926..117805937,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000451!1.92e-82!10;CL:0000990!1.39e-64!8;CL:0000453!1.71e-46!5;CL:0000840!1.73e-38!5;CL:0001029!1.73e-38!5;CL:0000784!1.07e-28!3;CL:0000738!2.07e-20!140;CL:0001014!5.34e-20!2;CL:0001016!5.34e-20!2;CL:0000037!4.38e-16!172;CL:0000566!4.38e-16!172;CL:0000763!1.21e-15!112;CL:0000049!1.21e-15!112;CL:0000988!4.84e-15!182;CL:0000767!6.97e-13!3;CL:0002009!2.65e-12!65;CL:0002032!2.05e-11!165;CL:0000837!2.05e-11!165;CL:0000557!3.74e-11!71;CL:0000766!3.41e-10!76;CL:0002393!1.41e-09!9;CL:0002397!1.41e-09!9;CL:0002194!4.91e-08!63;CL:0000576!4.91e-08!63;CL:0000040!4.91e-08!63;CL:0000559!4.91e-08!63;CL:0000839!3.82e-07!70;CL:0002031!4.27e-07!124 | |ontology_enrichment_celltype=CL:0000451!1.92e-82!10;CL:0000990!1.39e-64!8;CL:0000453!1.71e-46!5;CL:0000840!1.73e-38!5;CL:0001029!1.73e-38!5;CL:0000784!1.07e-28!3;CL:0000738!2.07e-20!140;CL:0001014!5.34e-20!2;CL:0001016!5.34e-20!2;CL:0000037!4.38e-16!172;CL:0000566!4.38e-16!172;CL:0000763!1.21e-15!112;CL:0000049!1.21e-15!112;CL:0000988!4.84e-15!182;CL:0000767!6.97e-13!3;CL:0002009!2.65e-12!65;CL:0002032!2.05e-11!165;CL:0000837!2.05e-11!165;CL:0000557!3.74e-11!71;CL:0000766!3.41e-10!76;CL:0002393!1.41e-09!9;CL:0002397!1.41e-09!9;CL:0002194!4.91e-08!63;CL:0000576!4.91e-08!63;CL:0000040!4.91e-08!63;CL:0000559!4.91e-08!63;CL:0000839!3.82e-07!70;CL:0002031!4.27e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000451;7.19e-92;10!CL:0000784;2.27e-84;3!CL:0001014;1.13e-57;2!CL:0001016;1.13e-57;2!CL:0000453;1.78e-51;5!CL:0000990;1.70e-50;8!CL:0000840;4.53e-43;5 | |ontology_enrichment_celltype_v019=CL:0000451;7.19e-92;10!CL:0000784;2.27e-84;3!CL:0001014;1.13e-57;2!CL:0001016;1.13e-57;2!CL:0000453;1.78e-51;5!CL:0000990;1.70e-50;8!CL:0000840;4.53e-43;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000451,5.68e-92,10;CL:0000784,2.27e-84,3;CL:0001014,1.13e-57,2;CL:0001016,1.13e-57,2;CL:0000453,1.37e-51,5;CL:0000990,1.32e-50,8;CL:0000840,4.21e-43,5;CL:0001029,4.21e-43,5;CL:0000738,2.51e-10,136;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1;UBERON:0002371!9.55e-10!80;UBERON:0002193!1.41e-09!112;UBERON:0001474!5.70e-09!86;UBERON:0002390!6.27e-09!102;UBERON:0003061!6.27e-09!102;UBERON:0002405!9.90e-08!115;UBERON:0004765!1.98e-07!101;UBERON:0001434!1.98e-07!101 | |ontology_enrichment_uberon=UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1;UBERON:0002371!9.55e-10!80;UBERON:0002193!1.41e-09!112;UBERON:0001474!5.70e-09!86;UBERON:0002390!6.27e-09!102;UBERON:0003061!6.27e-09!102;UBERON:0002405!9.90e-08!115;UBERON:0004765!1.98e-07!101;UBERON:0001434!1.98e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0,0.26591592103773,1.66943437013739,3.43196946468077,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.99895566206002,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,0.797189041880179,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,0,0.26591592103773,1.66943437013739,3.43196946468077,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.99895566206002,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,0.797189041880179,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:117805926..117805937,+ | |short_description=p@chr11:117805926..117805937,+ | ||
}} | }} |
Latest revision as of 18:40, 23 July 2015
Short description: | p@chr11:117805926..117805937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117805926..117805937, + |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 5.68e-92 | 10 |
plasmacytoid dendritic cell | 2.27e-84 | 3 |
CD1a-positive Langerhans cell | 1.13e-57 | 2 |
immature CD1a-positive Langerhans cell | 1.13e-57 | 2 |
Langerhans cell | 1.37e-51 | 5 |
conventional dendritic cell | 1.32e-50 | 8 |
immature conventional dendritic cell | 4.21e-43 | 5 |
common dendritic progenitor | 4.21e-43 | 5 |
leukocyte | 2.51e-10 | 136 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |