FFCP PHASE1:Hg19::chr11:1263705..1263748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1263705..1263748,+ | |||
|coexpression_cluster_id=C251 | |||
|description=CAGE_peak_at_chr11:1263705..1263748,+ | |description=CAGE_peak_at_chr11:1263705..1263748,+ | ||
|id=chr11:1263705..1263748,+ | |id=chr11:1263705..1263748,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;8.84e-13;1!UBERON:0006595;1.92e-07;86!UBERON:0008814;6.42e-07;2!UBERON:0010056;6.42e-07;2!UBERON:0006965;7.83e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!3.52e-12!129;UBERON:0004185!3.52e-12!129;UBERON:0003127!1.08e-11!2;UBERON:0001041!5.74e-11!98;UBERON:0001007!1.46e-10!155;UBERON:0001555!1.46e-10!155;UBERON:0007026!1.46e-10!155;UBERON:0000077!1.14e-09!130;UBERON:0000065!2.56e-09!53;UBERON:0004119!2.71e-09!169;UBERON:0000925!2.71e-09!169;UBERON:0006595!2.71e-09!169;UBERON:0001004!4.49e-09!72;UBERON:0005178!3.44e-08!34;UBERON:0002224!3.44e-08!34;UBERON:0005181!6.39e-08!35;UBERON:0001723!8.17e-08!3;UBERON:0001033!8.17e-08!3;UBERON:0010056!8.17e-08!3;UBERON:0000915!9.95e-08!52;UBERON:0007023!1.24e-07!115;UBERON:0000072!2.11e-07!46;UBERON:0008947!3.73e-07!38;UBERON:0003258!3.73e-07!38;UBERON:0000078!5.76e-07!18;UBERON:0002372!9.91e-07!1;UBERON:0001961!9.91e-07!1;UBERON:0001744!9.91e-07!1;UBERON:0001735!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.01e-23;2!UBERON:0001723;1.18e-15;3!UBERON:0001033;1.18e-15;3!UBERON:0002372;7.03e-13;1!UBERON:0001961;7.03e-13;1!UBERON:0001744;7.03e-13;1!UBERON:0001042;7.03e-13;1!UBERON:0001735;7.03e-13;1!UBERON:0003126;1.96e-07;7!UBERON:0001005;1.96e-07;7!UBERON:0002294;2.41e-07;7!UBERON:0001173;2.41e-07;7!UBERON:0006562;4.56e-07;2!UBERON:0000341;6.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.01e-23,2;UBERON:0001723,1.32e-15,3;UBERON:0001033,1.32e-15,3;UBERON:0010056,1.32e-15,3;UBERON:0002372,7.03e-13,1;UBERON:0001961,7.03e-13,1;UBERON:0001744,7.03e-13,1;UBERON:0001735,7.03e-13,1;UBERON:0001042,1.24e-10,10;UBERON:0009145,1.24e-10,10;UBERON:0004921,9.54e-10,118;UBERON:0006562,1.03e-09,11;UBERON:0001007,2.94e-09,145;UBERON:0001555,2.94e-09,145;UBERON:0007026,2.94e-09,145;UBERON:0001041,3.19e-09,87;UBERON:0000166,2.33e-08,22;UBERON:0004119,3.13e-08,160;UBERON:0000925,3.13e-08,160;UBERON:0006595,3.13e-08,160;UBERON:0000072,3.45e-08,47;UBERON:0000161,1.22e-07,36;UBERON:0003126,1.96e-07,7;UBERON:0001005,1.96e-07,7;UBERON:0000065,4.51e-07,54;UBERON:0000341,6.80e-07,2;UBERON:0001004,9.46e-07,74 | |||
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|short_description=p@chr11:1263705..1263748,+ | |short_description=p@chr11:1263705..1263748,+ | ||
}} | }} |
Latest revision as of 19:46, 23 July 2015
Short description: | p@chr11:1263705..1263748, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1263705..1263748, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.01e-23 | 2 |
tongue | 1.32e-15 | 3 |
gustatory system | 1.32e-15 | 3 |
future tongue | 1.32e-15 | 3 |
tonsil | 7.03e-13 | 1 |
mucosa-associated lymphoid tissue | 7.03e-13 | 1 |
lymphoid tissue | 7.03e-13 | 1 |
tonsillar ring | 7.03e-13 | 1 |
chordate pharynx | 1.24e-10 | 10 |
pharyngeal region of foregut | 1.24e-10 | 10 |
subdivision of digestive tract | 9.54e-10 | 118 |
pharynx | 1.03e-09 | 11 |
digestive system | 2.94e-09 | 145 |
digestive tract | 2.94e-09 | 145 |
primitive gut | 2.94e-09 | 145 |
foregut | 3.19e-09 | 87 |
oral opening | 2.33e-08 | 22 |
endoderm-derived structure | 3.13e-08 | 160 |
endoderm | 3.13e-08 | 160 |
presumptive endoderm | 3.13e-08 | 160 |
segment of respiratory tract | 3.45e-08 | 47 |
orifice | 1.22e-07 | 36 |
trachea | 1.96e-07 | 7 |
respiratory airway | 1.96e-07 | 7 |
respiratory tract | 4.51e-07 | 54 |
throat | 6.80e-07 | 2 |
respiratory system | 9.46e-07 | 74 |