FFCP PHASE1:Hg19::chr11:1263870..1263886,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1263870..1263886,+ | |||
|coexpression_cluster_id=C251 | |||
|description=CAGE_peak_at_chr11:1263870..1263886,+ | |description=CAGE_peak_at_chr11:1263870..1263886,+ | ||
|id=chr11:1263870..1263886,+ | |id=chr11:1263870..1263886,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.61e-13;1!UBERON:0006595;6.91e-08;86!UBERON:0008814;3.18e-07;2!UBERON:0010056;3.18e-07;2!UBERON:0006965;3.70e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!5.03e-13!129;UBERON:0004185!5.03e-13!129;UBERON:0003127!3.53e-12!2;UBERON:0000341!1.85e-11!2;UBERON:0001007!2.34e-11!155;UBERON:0001555!2.34e-11!155;UBERON:0007026!2.34e-11!155;UBERON:0007023!8.35e-11!115;UBERON:0000077!2.34e-10!130;UBERON:0001041!3.15e-10!98;UBERON:0004119!5.00e-10!169;UBERON:0000925!5.00e-10!169;UBERON:0006595!5.00e-10!169;UBERON:0001723!3.19e-08!3;UBERON:0001033!3.19e-08!3;UBERON:0010056!3.19e-08!3;UBERON:0001004!3.75e-08!72;UBERON:0000065!3.91e-08!53;UBERON:0000078!2.48e-07!18;UBERON:0002372!5.90e-07!1;UBERON:0001961!5.90e-07!1;UBERON:0001744!5.90e-07!1;UBERON:0001735!5.90e-07!1 | |ontology_enrichment_uberon=UBERON:0004921!5.03e-13!129;UBERON:0004185!5.03e-13!129;UBERON:0003127!3.53e-12!2;UBERON:0000341!1.85e-11!2;UBERON:0001007!2.34e-11!155;UBERON:0001555!2.34e-11!155;UBERON:0007026!2.34e-11!155;UBERON:0007023!8.35e-11!115;UBERON:0000077!2.34e-10!130;UBERON:0001041!3.15e-10!98;UBERON:0004119!5.00e-10!169;UBERON:0000925!5.00e-10!169;UBERON:0006595!5.00e-10!169;UBERON:0001723!3.19e-08!3;UBERON:0001033!3.19e-08!3;UBERON:0010056!3.19e-08!3;UBERON:0001004!3.75e-08!72;UBERON:0000065!3.91e-08!53;UBERON:0000078!2.48e-07!18;UBERON:0002372!5.90e-07!1;UBERON:0001961!5.90e-07!1;UBERON:0001744!5.90e-07!1;UBERON:0001735!5.90e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.58e-25;2!UBERON:0001723;1.22e-16;3!UBERON:0001033;1.22e-16;3!UBERON:0002372;1.82e-13;1!UBERON:0001961;1.82e-13;1!UBERON:0001744;1.82e-13;1!UBERON:0001042;1.82e-13;1!UBERON:0001735;1.82e-13;1!UBERON:0003126;8.35e-08;7!UBERON:0001005;8.35e-08;7!UBERON:0002294;9.56e-08;7!UBERON:0001173;9.56e-08;7!UBERON:0006562;2.28e-07;2!UBERON:0000341;4.83e-07;2!UBERON:0000165;5.26e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.58e-25,2;UBERON:0001723,1.27e-16,3;UBERON:0001033,1.27e-16,3;UBERON:0010056,1.27e-16,3;UBERON:0002372,1.82e-13,1;UBERON:0001961,1.82e-13,1;UBERON:0001744,1.82e-13,1;UBERON:0001735,1.82e-13,1;UBERON:0001042,2.84e-11,10;UBERON:0009145,2.84e-11,10;UBERON:0004921,1.86e-10,118;UBERON:0006562,2.68e-10,11;UBERON:0001007,5.67e-10,145;UBERON:0001555,5.67e-10,145;UBERON:0007026,5.67e-10,145;UBERON:0007023,4.65e-09,114;UBERON:0004119,6.90e-09,160;UBERON:0000925,6.90e-09,160;UBERON:0006595,6.90e-09,160;UBERON:0000166,7.34e-09,22;UBERON:0000072,1.03e-08,47;UBERON:0000161,4.16e-08,36;UBERON:0001041,8.01e-08,87;UBERON:0003126,8.35e-08,7;UBERON:0001005,8.35e-08,7;UBERON:0000065,1.56e-07,54;UBERON:0001004,3.30e-07,74;UBERON:0000341,4.42e-07,2;UBERON:0000165,9.21e-07,29;UBERON:0000930,9.21e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6863920421339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0,0,0,0,0,0,2.14825409610731,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,4.69396576873162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,19.6376755160204,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71086837884329,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,1.89093383216518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,1.91910583710883,0.476128862927481,0,0,0,0,0,3.70118471424834,2.05339980651169,18.5218145790116,12.9099969706817,11.9757728356565,0,0,0,0,0,0.855690109280065,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6863920421339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78947183551498,0,0,0,0,0,0,2.14825409610731,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,4.69396576873162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0,0,0,19.6376755160204,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71086837884329,0,0.427149650270779,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,1.89093383216518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,1.91910583710883,0.476128862927481,0,0,0,0,0,3.70118471424834,2.05339980651169,18.5218145790116,12.9099969706817,11.9757728356565,0,0,0,0,0,0.855690109280065,0,0,0,0 | ||
|short_description=p@chr11:1263870..1263886,+ | |short_description=p@chr11:1263870..1263886,+ | ||
}} | }} |
Latest revision as of 19:46, 23 July 2015
Short description: | p@chr11:1263870..1263886, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1263870..1263886, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.58e-25 | 2 |
tongue | 1.27e-16 | 3 |
gustatory system | 1.27e-16 | 3 |
future tongue | 1.27e-16 | 3 |
tonsil | 1.82e-13 | 1 |
mucosa-associated lymphoid tissue | 1.82e-13 | 1 |
lymphoid tissue | 1.82e-13 | 1 |
tonsillar ring | 1.82e-13 | 1 |
chordate pharynx | 2.84e-11 | 10 |
pharyngeal region of foregut | 2.84e-11 | 10 |
subdivision of digestive tract | 1.86e-10 | 118 |
pharynx | 2.68e-10 | 11 |
digestive system | 5.67e-10 | 145 |
digestive tract | 5.67e-10 | 145 |
primitive gut | 5.67e-10 | 145 |
adult organism | 4.65e-09 | 114 |
endoderm-derived structure | 6.90e-09 | 160 |
endoderm | 6.90e-09 | 160 |
presumptive endoderm | 6.90e-09 | 160 |
oral opening | 7.34e-09 | 22 |
segment of respiratory tract | 1.03e-08 | 47 |
orifice | 4.16e-08 | 36 |
foregut | 8.01e-08 | 87 |
trachea | 8.35e-08 | 7 |
respiratory airway | 8.35e-08 | 7 |
respiratory tract | 1.56e-07 | 54 |
respiratory system | 3.30e-07 | 74 |
throat | 4.42e-07 | 2 |
mouth | 9.21e-07 | 29 |
stomodeum | 9.21e-07 | 29 |