FFCP PHASE1:Hg19::chr11:19441234..19441247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:19441234..19441247,+ | |||
|description=CAGE_peak_at_chr11:19441234..19441247,+ | |description=CAGE_peak_at_chr11:19441234..19441247,+ | ||
|id=chr11:19441234..19441247,+ | |id=chr11:19441234..19441247,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.56e-10!75;CL:0000055!1.79e-08!180;CL:0002556!3.97e-07!6;CL:0002552!7.51e-07!5 | |ontology_enrichment_celltype=CL:0000057!1.56e-10!75;CL:0000055!1.79e-08!180;CL:0002556!3.97e-07!6;CL:0002552!7.51e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002504;1.35e-17;3!CL:1000279;1.35e-17;3!CL:1000280;1.35e-17;3!CL:0002195;1.19e-11;2!CL:0002571;1.19e-11;2!CL:0002590;2.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,1.21e-17,3;CL:1000279,1.21e-17,3;CL:1000280,1.21e-17,3;CL:0002195,8.58e-12,2;CL:0002571,8.58e-12,2;CL:0002590,2.04e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;8.97e-11;5!UBERON:0003124;5.25e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;3.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.13e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.98e-10!169;UBERON:0000925!7.98e-10!169;UBERON:0006595!7.98e-10!169;UBERON:0001007!1.70e-09!155;UBERON:0001555!1.70e-09!155;UBERON:0007026!1.70e-09!155;UBERON:0003929!1.83e-08!54;UBERON:0005911!2.73e-07!82;UBERON:0001758!3.97e-07!6;UBERON:0003672!3.97e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;8.97e-11;5!UBERON:0000160;1.34e-07;17!UBERON:0007195;2.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,9.30e-11,5;UBERON:0004117,9.30e-11,5;UBERON:0007689,9.30e-11,5;UBERON:0007123,9.30e-11,5;UBERON:0003091,9.30e-11,5;UBERON:0003929,2.33e-08,54;UBERON:0004119,3.10e-08,160;UBERON:0000925,3.10e-08,160;UBERON:0006595,3.10e-08,160;UBERON:0000160,1.33e-07,17;UBERON:0005911,2.61e-07,82;UBERON:0001007,2.95e-07,145;UBERON:0001555,2.95e-07,145;UBERON:0007026,2.95e-07,145;UBERON:0007195,2.95e-07,1 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,1.01392563272577,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,1.14734648299525,0,0,0,0,0.311211035399766,0,0,0.605429710579726,0,0,0,0,0,0,0.323745888736263,0,0.61246251376468,0.245668634623536,0.413303124703062,1.18800285728205,1.7308685049499,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,0.919463387397059,0.901428353439581,0.113432183160021,0,0.213557388818567,0.847727604638247,0.300091096084402,0,0,0,0,0,1.26216887122057,1.10459878370759,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0,0,0,1.42977993658148,0,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0.178428988797162,1.10391690523754,0.117141414992713,0.902838299183157,0,0,0,0,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,1.07423381301644,0,0.512556597022804,1.02341449813341,0.321707842287215,0,0,0,0,0.519254429183621,0,1.20859449591622,0,0,0.918515585316854,0.364182336013434,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0.275673144969061,0.966782203814463,0.145016693914229,0.426133137080504,0,0,0,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,1.58189712359363,2.47819252100972,0,0,0,0,5.75591864266607,3.29444435683266,1.41374882814824,0,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.449341755736634,1.43216939740487,0,0.0986434056369336,0,10.0023291130173,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0.797594390929008,0.69169171316418,1.52587995496613,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.706765357169704,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.240476460754601,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,3.25064991980226,0,2.0289608387862,0.314408610199332,0.828478110694391,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0.800055529326307,0,0,0,0,3.21662387062389,0.521988583930423,0.226705925512272,0,1.71315693154527,0,0.308801447160972,1.31570429747224,0.176689145945881,0,0,0,2.07258205038719,0.303859956177382,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,4.593682160298,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0.0752103283492573,0.20170506870352,0,0,8.35236779301493,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,2.30626162422861,0,0,0,0,0.590969204419841,0,0,0,0,0,0.431855182437243,0,0.357382720883282,0,0,0,2.40513409419076,0,0,0,0,0,0,0.423387050190929,0,0,0,0.559277158988962,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0.679708458751268,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,3.47608773999902,1.20929600728513,0,0,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,1.01392563272577,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,1.14734648299525,0,0,0,0,0.311211035399766,0,0,0.605429710579726,0,0,0,0,0,0,0.323745888736263,0,0.61246251376468,0.245668634623536,0.413303124703062,1.18800285728205,1.7308685049499,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,0.919463387397059,0.901428353439581,0.113432183160021,0,0.213557388818567,0.847727604638247,0.300091096084402,0,0,0,0,0,1.26216887122057,1.10459878370759,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,1.22988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,1.04007436911366,0,0,0,1.42977993658148,0,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0.178428988797162,1.10391690523754,0.117141414992713,0.902838299183157,0,0,0,0,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,1.07423381301644,0,0.512556597022804,1.02341449813341,0.321707842287215,0,0,0,0,0.519254429183621,0,1.20859449591622,0,0,0.918515585316854,0.364182336013434,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0.275673144969061,0.966782203814463,0.145016693914229,0.426133137080504,0,0,0,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,1.58189712359363,2.47819252100972,0,0,0,0,5.75591864266607,3.29444435683266,1.41374882814824,0,0,0,0.48763373908959,0,0,0.136499911407986,0.707027159768564,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.449341755736634,1.43216939740487,0,0.0986434056369336,0,10.0023291130173,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0.797594390929008,0.69169171316418,1.52587995496613,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.706765357169704,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.240476460754601,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.407992870545287,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,3.25064991980226,0,2.0289608387862,0.314408610199332,0.828478110694391,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0.800055529326307,0,0,0,0,3.21662387062389,0.521988583930423,0.226705925512272,0,1.71315693154527,0,0.308801447160972,1.31570429747224,0.176689145945881,0,0,0,2.07258205038719,0.303859956177382,0,0,0,0,0,0.491545817507439,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,4.593682160298,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0.0752103283492573,0.20170506870352,0,0,8.35236779301493,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,2.30626162422861,0,0,0,0,0.590969204419841,0,0,0,0,0,0.431855182437243,0,0.357382720883282,0,0,0,2.40513409419076,0,0,0,0,0,0,0.423387050190929,0,0,0,0.559277158988962,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0.679708458751268,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,3.47608773999902,1.20929600728513,0,0,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr11:19441234..19441247,+ | |short_description=p@chr11:19441234..19441247,+ | ||
}} | }} |
Latest revision as of 20:48, 23 July 2015
Short description: | p@chr11:19441234..19441247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19441234..19441247, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 1.21e-17 | 3 |
smooth muscle cell of large intestine | 1.21e-17 | 3 |
smooth muscle cell of colon | 1.21e-17 | 3 |
hepatic stem cell | 8.58e-12 | 2 |
hepatic mesenchymal stem cell | 8.58e-12 | 2 |
smooth muscle cell of the brain vasculature | 2.04e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 9.30e-11 | 5 |
pharyngeal pouch | 9.30e-11 | 5 |
thyroid diverticulum | 9.30e-11 | 5 |
pharyngeal pouch 2 | 9.30e-11 | 5 |
thyroid primordium | 9.30e-11 | 5 |
gut epithelium | 2.33e-08 | 54 |
endoderm-derived structure | 3.10e-08 | 160 |
endoderm | 3.10e-08 | 160 |
presumptive endoderm | 3.10e-08 | 160 |
intestine | 1.33e-07 | 17 |
endo-epithelium | 2.61e-07 | 82 |
digestive system | 2.95e-07 | 145 |
digestive tract | 2.95e-07 | 145 |
primitive gut | 2.95e-07 | 145 |
stroma of bone marrow | 2.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.13e-07 | 1 |