FFCP PHASE1:Hg19::chr11:19619742..19619759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:19619742..19619759,+ | |||
|coexpression_cluster_id=C1107 | |coexpression_cluster_id=C1107 | ||
|description=CAGE_peak_at_chr11:19619742..19619759,+ | |description=CAGE_peak_at_chr11:19619742..19619759,+ | ||
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|ontology_enrichment_celltype=CL:0000188!6.20e-08!9 | |ontology_enrichment_celltype=CL:0000188!6.20e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000515;3.78e-30;3!CL:0000056;8.73e-23;4!CL:0000680;2.80e-13;7!CL:0000222;3.76e-11;1!CL:0002174;4.80e-11;1!CL:0000501;4.80e-11;1!CL:0002321;1.00e-10;15 | |ontology_enrichment_celltype_v019=CL:0000515;3.78e-30;3!CL:0000056;8.73e-23;4!CL:0000680;2.80e-13;7!CL:0000222;3.76e-11;1!CL:0002174;4.80e-11;1!CL:0000501;4.80e-11;1!CL:0002321;1.00e-10;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.74e-23,4;CL:0002174,5.05e-11,1;CL:0000501,5.05e-11,1;CL:0000680,1.39e-09,58;CL:0000056,1.39e-09,58;CL:0000355,1.39e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000515;8.73e-23;4 | |ontology_enrichment_development_v019=CL:0000515;8.73e-23;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;4.01e-21;16!UBERON:0002036;4.01e-21;16!UBERON:0001875;7.55e-20;2!UBERON:0006514;7.55e-20;2!UBERON:0009663;7.31e-13;7!UBERON:0002385;1.93e-10;31!UBERON:0001015;1.93e-10;31!UBERON:0000383;1.93e-10;31!UBERON:0002420;3.99e-10;9!UBERON:0000125;3.99e-10;9!UBERON:0007245;3.99e-10;9!UBERON:0002308;3.99e-10;9!UBERON:0010009;3.99e-10;9!UBERON:0010011;3.99e-10;9!UBERON:0000454;3.99e-10;9 | |ontology_enrichment_uberon_v019=UBERON:0001134;4.01e-21;16!UBERON:0002036;4.01e-21;16!UBERON:0001875;7.55e-20;2!UBERON:0006514;7.55e-20;2!UBERON:0009663;7.31e-13;7!UBERON:0002385;1.93e-10;31!UBERON:0001015;1.93e-10;31!UBERON:0000383;1.93e-10;31!UBERON:0002420;3.99e-10;9!UBERON:0000125;3.99e-10;9!UBERON:0007245;3.99e-10;9!UBERON:0002308;3.99e-10;9!UBERON:0010009;3.99e-10;9!UBERON:0010011;3.99e-10;9!UBERON:0000454;3.99e-10;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,7.92e-20,2;UBERON:0006514,7.92e-20,2;UBERON:0009663,7.46e-13,7;UBERON:0001134,3.20e-11,62;UBERON:0002036,3.20e-11,62;UBERON:0003082,3.20e-11,62;UBERON:0002385,7.84e-11,64;UBERON:0001015,7.84e-11,64;UBERON:0000383,7.84e-11,64;UBERON:0002420,4.06e-10,9;UBERON:0000125,4.06e-10,9;UBERON:0007245,4.06e-10,9;UBERON:0002308,4.06e-10,9;UBERON:0010009,4.06e-10,9;UBERON:0010011,4.06e-10,9;UBERON:0000454,4.06e-10,9;UBERON:0002329,1.21e-09,71;UBERON:0003059,1.21e-09,71;UBERON:0007282,1.21e-09,71;UBERON:0004290,1.21e-09,71;UBERON:0009618,1.21e-09,71;UBERON:0003077,1.72e-09,72;UBERON:0007285,1.72e-09,72;UBERON:0007524,2.41e-09,73;UBERON:0007503,1.15e-08,78;UBERON:0000486,4.54e-08,83 | |||
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|short_description=p@chr11:19619742..19619759,+ | |short_description=p@chr11:19619742..19619759,+ | ||
}} | }} |
Latest revision as of 20:50, 23 July 2015
Short description: | p@chr11:19619742..19619759, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19619742..19619759, + |
Coexpression cluster: | C1107_Myoblast_mesenchymal_skeletal_diaphragm_tongue_Prostate_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.74e-23 | 4 |
follicular cell of ovary | 5.05e-11 | 1 |
granulosa cell | 5.05e-11 | 1 |
muscle precursor cell | 1.39e-09 | 58 |
myoblast | 1.39e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 7.92e-20 | 2 |
pallidum | 7.92e-20 | 2 |
telencephalic nucleus | 7.46e-13 | 7 |
skeletal muscle tissue | 3.20e-11 | 62 |
striated muscle tissue | 3.20e-11 | 62 |
myotome | 3.20e-11 | 62 |
muscle tissue | 7.84e-11 | 64 |
musculature | 7.84e-11 | 64 |
musculature of body | 7.84e-11 | 64 |
basal ganglion | 4.06e-10 | 9 |
neural nucleus | 4.06e-10 | 9 |
nuclear complex of neuraxis | 4.06e-10 | 9 |
nucleus of brain | 4.06e-10 | 9 |
aggregate regional part of brain | 4.06e-10 | 9 |
collection of basal ganglia | 4.06e-10 | 9 |
cerebral subcortex | 4.06e-10 | 9 |
somite | 1.21e-09 | 71 |
presomitic mesoderm | 1.21e-09 | 71 |
presumptive segmental plate | 1.21e-09 | 71 |
dermomyotome | 1.21e-09 | 71 |
trunk paraxial mesoderm | 1.21e-09 | 71 |
paraxial mesoderm | 1.72e-09 | 72 |
presumptive paraxial mesoderm | 1.72e-09 | 72 |
dense mesenchyme tissue | 2.41e-09 | 73 |
epithelial vesicle | 1.15e-08 | 78 |
multilaminar epithelium | 4.54e-08 | 83 |