FFCP PHASE1:Hg19::chr11:20075386..20075404,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:20075386..20075404,+ | |||
|coexpression_cluster_id=C263 | |coexpression_cluster_id=C263 | ||
|description=CAGE_peak_at_chr11:20075386..20075404,+ | |description=CAGE_peak_at_chr11:20075386..20075404,+ | ||
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|ontology_enrichment_celltype_v019=CL:0002623;4.65e-27;3!CL:0000622;1.12e-16;5!CL:0000154;4.53e-14;6!CL:0000575;3.70e-11;2!CL:0000150;1.05e-09;9!CL:0002251;1.53e-09;20 | |ontology_enrichment_celltype_v019=CL:0002623;4.65e-27;3!CL:0000622;1.12e-16;5!CL:0000154;4.53e-14;6!CL:0000575;3.70e-11;2!CL:0000150;1.05e-09;9!CL:0002251;1.53e-09;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.07e-27,3;CL:0000622,1.03e-16,5;CL:0000154,4.24e-14,6;CL:0000575,3.35e-11,2;CL:0000150,1.01e-09,9;CL:0002251,1.53e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.47e-11;2!UBERON:0010056;2.47e-11;2 | |ontology_enrichment_development_v019=UBERON:0008814;2.47e-11;2!UBERON:0010056;2.47e-11;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr11:20075386..20075404,+ | |short_description=p@chr11:20075386..20075404,+ | ||
}} | }} |
Latest revision as of 20:53, 23 July 2015
Short description: | p@chr11:20075386..20075404, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:20075386..20075404, + |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.07e-27 | 3 |
acinar cell | 1.03e-16 | 5 |
protein secreting cell | 4.24e-14 | 6 |
corneal epithelial cell | 3.35e-11 | 2 |
glandular epithelial cell | 1.01e-09 | 9 |
epithelial cell of alimentary canal | 1.53e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
oral opening | 3.23e-32 | 22 |
chordate pharynx | 4.32e-32 | 10 |
pharyngeal region of foregut | 4.32e-32 | 10 |
pharynx | 3.16e-29 | 11 |
tongue | 3.11e-27 | 3 |
gustatory system | 3.11e-27 | 3 |
future tongue | 3.11e-27 | 3 |
mouth | 1.81e-24 | 29 |
stomodeum | 1.81e-24 | 29 |
tonsil | 1.88e-21 | 1 |
mucosa-associated lymphoid tissue | 1.88e-21 | 1 |
lymphoid tissue | 1.88e-21 | 1 |
tonsillar ring | 1.88e-21 | 1 |
surface | 6.31e-21 | 1 |
anterior region of body | 4.30e-20 | 62 |
craniocervical region | 4.30e-20 | 62 |
orifice | 1.01e-19 | 36 |
subdivision of head | 1.50e-19 | 49 |
gland of gut | 1.94e-18 | 10 |
upper respiratory tract | 3.93e-17 | 19 |
head | 4.33e-17 | 56 |
saliva-secreting gland | 4.24e-14 | 6 |
gland of oral region | 4.24e-14 | 6 |
gland of foregut | 4.24e-14 | 6 |
oral gland | 4.24e-14 | 6 |
oral cavity | 4.24e-14 | 6 |
respiratory system | 6.53e-13 | 74 |
surface structure | 1.92e-12 | 99 |
pharyngeal arch system | 1.41e-10 | 18 |
neck | 6.04e-09 | 10 |
foregut | 3.99e-08 | 87 |
sense organ | 4.75e-08 | 24 |
sensory system | 4.75e-08 | 24 |
entire sense organ system | 4.75e-08 | 24 |
segment of respiratory tract | 3.94e-07 | 47 |
ectoderm-derived structure | 6.86e-07 | 171 |
ectoderm | 6.86e-07 | 171 |
presumptive ectoderm | 6.86e-07 | 171 |