FFCP PHASE1:Hg19::chr11:31827535..31827565,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5080 | |EntrezGene=entrezgene:5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8620 | |HGNC=HGNC:8620 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533156_5end | |association_with_transcript=0bp_to_ENST00000533156_5end | ||
|cluster_id=chr11:31827535..31827565,- | |||
|coexpression_cluster_id=C3140 | |coexpression_cluster_id=C3140 | ||
|description=CAGE_peak_11_at_PAX6_5end | |description=CAGE_peak_11_at_PAX6_5end | ||
Revision as of 21:30, 23 July 2015
| Short description: | p11@PAX6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_PAX6_5end |
| Coexpression cluster: | C3140_argyrophil_Lens_Ciliary_eye_small_Astrocyte_Iris |
| Association with transcript: | 0bp_to_ENST00000533156_5end |
| EntrezGene: | 5080 |
| HGNC: | 8620 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p11@PAX6 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| crystallin accumulating cell | 6.27e-44 | 4 |
| vertebrate lens cell | 6.27e-44 | 4 |
| lens epithelial cell | 6.27e-44 | 4 |
| ciliated cell | 1.39e-34 | 3 |
| ciliated epithelial cell | 1.39e-34 | 3 |
| multi-ciliated epithelial cell | 1.39e-34 | 3 |
| non-pigmented ciliary epithelial cell | 1.39e-34 | 3 |
| astrocyte of the cerebral cortex | 3.85e-34 | 3 |
| columnar/cuboidal epithelial cell | 1.51e-19 | 27 |
| oligodendrocyte | 5.04e-15 | 7 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| pigment epithelium of eye | 1.48e-63 | 11 |
| anterior segment of eyeball | 8.41e-50 | 14 |
| atypical epithelium | 2.16e-45 | 4 |
| cuboidal epithelium | 6.27e-44 | 4 |
| transparent eye structure | 6.27e-44 | 4 |
| simple cuboidal epithelium | 6.27e-44 | 4 |
| cranial placode | 6.27e-44 | 4 |
| lens of camera-type eye | 6.27e-44 | 4 |
| epithelium of lens | 6.27e-44 | 4 |
| lens placode | 6.27e-44 | 4 |
Showing 1 to 10 of 50 entries
