FFCP PHASE1:Hg19::chr11:66824276..66824298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=29984 | |EntrezGene=entrezgene:29984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=670 | |HGNC=HGNC:670 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=O00212 | |UniProt=uniprot:O00212 | ||
|association_with_transcript=0bp_to_ENST00000308831,NM_014578,uc001ojv.2_5end | |association_with_transcript=0bp_to_ENST00000308831,NM_014578,uc001ojv.2_5end | ||
|cluster_id=chr11:66824276..66824298,+ | |||
|coexpression_cluster_id=C511 | |coexpression_cluster_id=C511 | ||
|description=CAGE_peak_2_at_RHOD_5end | |description=CAGE_peak_2_at_RHOD_5end |
Revision as of 01:29, 24 July 2015
Short description: | p2@RHOD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHOD_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 0bp_to_ENST00000308831, NM_014578, uc001ojv.2_5end |
EntrezGene: | 29984 |
HGNC: | 670 |
UniProt: | O00212 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@RHOD |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.73e-36 | 253 |
embryonic cell | 2.46e-19 | 250 |
endo-epithelial cell | 1.57e-13 | 42 |
endodermal cell | 1.88e-11 | 58 |
squamous epithelial cell | 9.40e-11 | 63 |
mesodermal cell | 1.10e-08 | 121 |
epithelial cell of alimentary canal | 4.70e-07 | 20 |
respiratory epithelial cell | 6.00e-07 | 13 |
extraembryonic cell | 7.83e-07 | 19 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.40e-15 | 160 |
endoderm | 1.40e-15 | 160 |
presumptive endoderm | 1.40e-15 | 160 |
trunk | 1.44e-14 | 199 |
digestive system | 1.94e-11 | 145 |
digestive tract | 1.94e-11 | 145 |
primitive gut | 1.94e-11 | 145 |
primordium | 1.33e-10 | 160 |
subdivision of trunk | 1.40e-10 | 112 |
respiratory system | 6.43e-10 | 74 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.97e-08 | 106 |
adenocarcinoma | 5.73e-07 | 25 |
Showing 1 to 2 of 2 entries