FFCP PHASE1:Hg19::chr11:94427497..94427507,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:94427497..94427507,- to FFCP PHASE1:Hg19::chr11:94427497..94427507,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:94427497..94427507,- | |||
|description=CAGE_peak_at_chr11:94427497..94427507,- | |||
|id=chr11:94427497..94427507,- | |||
|ontology_enrichment_celltype=CL:0002368!3.68e-32!13;CL:0002076!2.10e-28!43;CL:0000223!1.75e-22!59;CL:0002202!1.94e-21!9;CL:0002632!1.94e-21!9;CL:0002328!2.72e-17!3;CL:0000068!6.48e-17!3;CL:0000069!6.48e-17!3;CL:0000307!6.48e-17!3;CL:0000377!6.48e-17!3;CL:0000066!1.98e-16!254;CL:0002327!3.07e-13!4;CL:0000240!1.07e-08!6;CL:0000311!1.07e-08!6;CL:0000079!1.07e-08!6;CL:0000237!1.07e-08!6;CL:0000036!1.07e-08!6;CL:0000357!1.07e-08!6;CL:0000114!1.07e-08!6;CL:0002231!4.10e-08!3;CL:0002166!1.02e-07!3;CL:0000076!7.88e-07!62;CL:0002336!8.97e-07!1;CL:0002261!8.97e-07!1;CL:0002170!8.97e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002328;7.70e-34;3!CL:0002368;8.13e-31;13!CL:0002327;1.11e-25;4!CL:0002202;2.80e-25;9!CL:0002632;2.80e-25;9!CL:0000307;1.74e-09;3!CL:0002076;5.44e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,5.51e-34,3;CL:0002368,7.24e-31,13;CL:0002327,1.43e-25,4;CL:0002202,2.47e-25,9;CL:0002632,2.47e-25,9;CL:0002076,6.58e-10,42;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000223,2.81e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.74e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!7.52e-18!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.74e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.66e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004815!2.72e-17!3;UBERON:0002031!2.72e-17!3;UBERON:0007196!1.41e-13!14;UBERON:0001558!1.41e-13!14;UBERON:0001911!3.07e-13!4;UBERON:0005333!3.07e-13!4;UBERON:0008425!3.07e-13!4;UBERON:0005311!3.07e-13!4;UBERON:0002185!4.25e-13!4;UBERON:0005153!2.07e-10!37;UBERON:0003729!3.17e-10!5;UBERON:0001004!7.71e-10!72;UBERON:0000065!2.73e-08!53;UBERON:0003126!1.62e-07!7;UBERON:0001005!1.62e-07!7;UBERON:0004119!3.50e-07!169;UBERON:0000925!3.50e-07!169;UBERON:0006595!3.50e-07!169;UBERON:0005157!3.90e-07!51;UBERON:0005178!6.57e-07!34;UBERON:0002224!6.57e-07!34;UBERON:0000076!7.90e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;7.70e-34;3!UBERON:0002031;7.70e-34;3!UBERON:0001911;1.11e-25;4!UBERON:0002185;8.98e-21;5!UBERON:0007196;1.72e-15;15!UBERON:0001558;1.72e-15;15!UBERON:0000485;3.79e-15;7!UBERON:0000065;2.24e-08;44!UBERON:0005178;4.53e-07;34!UBERON:0002224;4.53e-07;34!UBERON:0005181;6.49e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.51e-34,3;UBERON:0002031,5.51e-34,3;UBERON:0001911,1.43e-25,4;UBERON:0005333,1.43e-25,4;UBERON:0008425,1.43e-25,4;UBERON:0005311,1.43e-25,4;UBERON:0002185,7.35e-21,5;UBERON:0007196,1.59e-15,15;UBERON:0001558,1.59e-15,15;UBERON:0000076,2.49e-13,8;UBERON:0000485,4.67e-12,9;UBERON:0005153,3.63e-11,37;UBERON:0005157,7.05e-09,47;UBERON:0000065,8.61e-08,54;UBERON:0005178,3.22e-07,34;UBERON:0002224,3.22e-07,34;UBERON:0005181,4.98e-07,35 | |||
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|short_description=p@chr11:94427497..94427507,- | |||
}} | }} |
Latest revision as of 03:39, 24 July 2015
Short description: | p@chr11:94427497..94427507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94427497..94427507, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 5.51e-34 | 3 |
respiratory epithelial cell | 7.24e-31 | 13 |
mammary gland epithelial cell | 1.43e-25 | 4 |
epithelial cell of tracheobronchial tree | 2.47e-25 | 9 |
epithelial cell of lower respiratory tract | 2.47e-25 | 9 |
endo-epithelial cell | 6.58e-10 | 42 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
endodermal cell | 2.81e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.51e-34 | 3 |
epithelium of bronchus | 5.51e-34 | 3 |
mammary gland | 1.43e-25 | 4 |
mammary bud | 1.43e-25 | 4 |
mammary ridge | 1.43e-25 | 4 |
mammary placode | 1.43e-25 | 4 |
bronchus | 7.35e-21 | 5 |
tracheobronchial tree | 1.59e-15 | 15 |
lower respiratory tract | 1.59e-15 | 15 |
external ectoderm | 2.49e-13 | 8 |
simple columnar epithelium | 4.67e-12 | 9 |
epithelial bud | 3.63e-11 | 37 |
epithelial fold | 7.05e-09 | 47 |
respiratory tract | 8.61e-08 | 54 |
thoracic cavity element | 3.22e-07 | 34 |
thoracic cavity | 3.22e-07 | 34 |
thoracic segment organ | 4.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.66e-08 | 14 |