FFCP PHASE1:Hg19::chr12:105863737..105863745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:105863737..105863745,+ | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_at_chr12:105863737..105863745,+ | |description=CAGE_peak_at_chr12:105863737..105863745,+ | ||
|id=chr12:105863737..105863745,+ | |id=chr12:105863737..105863745,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.88e-72!24;CL:0000115!3.65e-59!35;CL:0002078!4.64e-46!44;CL:0000071!5.14e-45!18;CL:0002546!5.14e-45!18;CL:1000413!1.56e-34!9;CL:0000213!1.95e-34!57;CL:0000215!1.95e-34!57;CL:0005020!2.76e-30!6;CL:0002138!2.76e-30!6;CL:0005022!2.76e-30!6;CL:0002543!1.20e-21!6;CL:0002544!6.91e-21!6;CL:0000222!3.48e-17!119;CL:0002618!1.38e-16!3;CL:0002545!2.73e-11!2;CL:0000076!4.43e-11!62 | |ontology_enrichment_celltype=CL:0002139!2.88e-72!24;CL:0000115!3.65e-59!35;CL:0002078!4.64e-46!44;CL:0000071!5.14e-45!18;CL:0002546!5.14e-45!18;CL:1000413!1.56e-34!9;CL:0000213!1.95e-34!57;CL:0000215!1.95e-34!57;CL:0005020!2.76e-30!6;CL:0002138!2.76e-30!6;CL:0005022!2.76e-30!6;CL:0002543!1.20e-21!6;CL:0002544!6.91e-21!6;CL:0000222!3.48e-17!119;CL:0002618!1.38e-16!3;CL:0002545!2.73e-11!2;CL:0000076!4.43e-11!62 | ||
|ontology_enrichment_celltype_v019=CL:0002618;4.54e-74;3!CL:0002139;2.79e-50;24!CL:0002138;6.30e-38;6!CL:0002543;1.52e-37;6!CL:0000115;7.10e-27;36!CL:0000071;2.47e-22;18!CL:0002078;1.10e-16;45!CL:0000213;2.51e-15;58!CL:0000215;2.51e-15;58!CL:0002615;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,3.54e-74,3;CL:0002139,2.50e-50,24;CL:0005020,6.30e-38,6;CL:0002138,6.30e-38,6;CL:0005022,6.30e-38,6;CL:0002543,1.34e-37,6;CL:0000115,1.18e-33,36;CL:0002078,5.70e-27,45;CL:0000071,2.27e-22,18;CL:0002546,2.27e-22,18;CL:0000213,5.77e-21,58;CL:0000215,5.77e-21,58;CL:0000222,4.51e-10,121;CL:0002615,1.81e-09,3 | |||
|ontology_enrichment_development_v019=CL:0005022;6.30e-38;6!CL:0002546;2.47e-22;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr12:105863737..105863745,+ | |short_description=p@chr12:105863737..105863745,+ | ||
}} | }} |
Latest revision as of 04:24, 24 July 2015
Short description: | p@chr12:105863737..105863745, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:105863737..105863745, + |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 3.54e-74 | 3 |
endothelial cell of vascular tree | 2.50e-50 | 24 |
lymphangioblast | 6.30e-38 | 6 |
endothelial cell of lymphatic vessel | 6.30e-38 | 6 |
vascular lymphangioblast | 6.30e-38 | 6 |
vein endothelial cell | 1.34e-37 | 6 |
endothelial cell | 1.18e-33 | 36 |
meso-epithelial cell | 5.70e-27 | 45 |
blood vessel endothelial cell | 2.27e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.27e-22 | 18 |
lining cell | 5.77e-21 | 58 |
barrier cell | 5.77e-21 | 58 |
mesodermal cell | 4.51e-10 | 121 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 6.33e-45 | 5 |
lymphatic vessel | 1.12e-28 | 8 |
lymph vasculature | 1.12e-28 | 8 |
lymphatic part of lymphoid system | 1.12e-28 | 8 |
vein | 2.27e-25 | 9 |
umbilical blood vessel | 2.27e-25 | 9 |
venous blood vessel | 2.27e-25 | 9 |
venous system | 2.27e-25 | 9 |
lymphoid system | 4.10e-23 | 10 |
blood vessel endothelium | 2.27e-22 | 18 |
endothelium | 2.27e-22 | 18 |
cardiovascular system endothelium | 2.27e-22 | 18 |
simple squamous epithelium | 2.09e-18 | 22 |
vessel | 6.69e-18 | 68 |
squamous epithelium | 2.91e-16 | 25 |
vasculature | 1.29e-15 | 78 |
vascular system | 1.29e-15 | 78 |
cardiovascular system | 3.49e-11 | 109 |
circulatory system | 6.96e-11 | 112 |
epithelial tube open at both ends | 3.93e-07 | 59 |
blood vessel | 3.93e-07 | 59 |
blood vasculature | 3.93e-07 | 59 |
vascular cord | 3.93e-07 | 59 |