FFCP PHASE1:Hg19::chr12:107928696..107928700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:107928696..107928700,+ | |||
|coexpression_cluster_id=C736 | |coexpression_cluster_id=C736 | ||
|description=CAGE_peak_at_chr12:107928696..107928700,+ | |description=CAGE_peak_at_chr12:107928696..107928700,+ | ||
|id=chr12:107928696..107928700,+ | |id=chr12:107928696..107928700,+ | ||
|ontology_enrichment_celltype=CL:0000623!1.77e-11!3;CL:0000825!1.77e-11!3;CL:0000084!1.40e-07!25;CL:0000827!1.40e-07!25;CL:0000838!5.70e-07!52;CL:0000542!8.62e-07!53;CL:0000051!8.62e-07!53 | |ontology_enrichment_celltype=CL:0000623!1.77e-11!3;CL:0000825!1.77e-11!3;CL:0000084!1.40e-07!25;CL:0000827!1.40e-07!25;CL:0000838!5.70e-07!52;CL:0000542!8.62e-07!53;CL:0000051!8.62e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.47e-25;18!CL:0000789;1.47e-25;18!CL:0002419;1.47e-25;18!CL:0000625;5.14e-19;11!CL:0000084;1.05e-18;25!CL:0000623;1.03e-17;3!CL:0000624;1.27e-09;6!CL:0000542;8.67e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.41e-25,18;CL:0000789,1.41e-25,18;CL:0002420,1.41e-25,18;CL:0002419,1.41e-25,18;CL:0000790,1.41e-25,18;CL:0000625,4.69e-19,11;CL:0000084,1.02e-18,25;CL:0000827,1.02e-18,25;CL:0000623,1.12e-17,3;CL:0000825,1.12e-17,3;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000624,1.32e-09,6;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.47e-25;18!CL:0000051;8.67e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002771!1.48e-09!3 | |ontology_enrichment_uberon=UBERON:0002771!1.48e-09!3 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:107928696..107928700,+ | |short_description=p@chr12:107928696..107928700,+ | ||
}} | }} |
Latest revision as of 04:32, 24 July 2015
Short description: | p@chr12:107928696..107928700, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:107928696..107928700, + |
Coexpression cluster: | C736_CD4_CD8_Natural_Neutrophils_Peripheral_Hepatocyte_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.41e-25 | 18 |
alpha-beta T cell | 1.41e-25 | 18 |
immature T cell | 1.41e-25 | 18 |
mature T cell | 1.41e-25 | 18 |
immature alpha-beta T cell | 1.41e-25 | 18 |
CD8-positive, alpha-beta T cell | 4.69e-19 | 11 |
T cell | 1.02e-18 | 25 |
pro-T cell | 1.02e-18 | 25 |
natural killer cell | 1.12e-17 | 3 |
pro-NK cell | 1.12e-17 | 3 |
lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
CD4-positive, alpha-beta T cell | 1.32e-09 | 6 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |