FFCP PHASE1:Hg19::chr12:109017389..109017424,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109017389..109017424,- | |||
|description=CAGE_peak_at_chr12:109017389..109017424,- | |description=CAGE_peak_at_chr12:109017389..109017424,- | ||
|id=chr12:109017389..109017424,- | |id=chr12:109017389..109017424,- | ||
|ontology_enrichment_celltype=CL:0000037!2.15e-46!172;CL:0000566!2.15e-46!172;CL:0002032!1.39e-42!165;CL:0000837!1.39e-42!165;CL:0000988!4.12e-42!182;CL:0000738!5.59e-37!140;CL:0000763!1.97e-35!112;CL:0000049!1.97e-35!112;CL:0002087!1.14e-32!119;CL:0002031!9.73e-32!124;CL:0000839!1.14e-26!70;CL:0000766!1.59e-26!76;CL:0000557!8.98e-25!71;CL:0002194!1.43e-24!63;CL:0000576!1.43e-24!63;CL:0000040!1.43e-24!63;CL:0000559!1.43e-24!63;CL:0002009!2.19e-23!65;CL:0002057!9.11e-18!42;CL:0000860!4.60e-17!45;CL:0000084!1.79e-10!25;CL:0000827!1.79e-10!25;CL:0000134!6.85e-10!358;CL:0002320!3.20e-09!365;CL:0002393!1.13e-08!9;CL:0002397!1.13e-08!9;CL:0000838!1.34e-07!52;CL:0000791!1.94e-07!18;CL:0000789!1.94e-07!18;CL:0002420!1.94e-07!18;CL:0002419!1.94e-07!18;CL:0000790!1.94e-07!18;CL:0000542!2.47e-07!53;CL:0000051!2.47e-07!53;CL:0000219!2.90e-07!390 | |ontology_enrichment_celltype=CL:0000037!2.15e-46!172;CL:0000566!2.15e-46!172;CL:0002032!1.39e-42!165;CL:0000837!1.39e-42!165;CL:0000988!4.12e-42!182;CL:0000738!5.59e-37!140;CL:0000763!1.97e-35!112;CL:0000049!1.97e-35!112;CL:0002087!1.14e-32!119;CL:0002031!9.73e-32!124;CL:0000839!1.14e-26!70;CL:0000766!1.59e-26!76;CL:0000557!8.98e-25!71;CL:0002194!1.43e-24!63;CL:0000576!1.43e-24!63;CL:0000040!1.43e-24!63;CL:0000559!1.43e-24!63;CL:0002009!2.19e-23!65;CL:0002057!9.11e-18!42;CL:0000860!4.60e-17!45;CL:0000084!1.79e-10!25;CL:0000827!1.79e-10!25;CL:0000134!6.85e-10!358;CL:0002320!3.20e-09!365;CL:0002393!1.13e-08!9;CL:0002397!1.13e-08!9;CL:0000838!1.34e-07!52;CL:0000791!1.94e-07!18;CL:0000789!1.94e-07!18;CL:0002420!1.94e-07!18;CL:0002419!1.94e-07!18;CL:0000790!1.94e-07!18;CL:0000542!2.47e-07!53;CL:0000051!2.47e-07!53;CL:0000219!2.90e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000473;4.81e-09;39!CL:0000234;4.81e-09;39!CL:0002127;3.20e-08;1!CL:0000911;3.20e-08;1!CL:0000814;3.20e-08;1 | |ontology_enrichment_celltype_v019=CL:0000473;4.81e-09;39!CL:0000234;4.81e-09;39!CL:0002127;3.20e-08;1!CL:0000911;3.20e-08;1!CL:0000814;3.20e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.00e-10,48;CL:0000234,4.00e-10,48;CL:0002194,1.13e-09,59;CL:0000576,1.13e-09,59;CL:0000040,1.13e-09,59;CL:0000559,1.13e-09,59;CL:0002009,2.62e-09,61;CL:0002087,6.50e-09,115;CL:0000839,1.71e-08,66;CL:0000557,2.41e-08,67;CL:0002127,4.11e-08,1;CL:0000914,4.11e-08,1;CL:0000911,4.11e-08,1;CL:0000814,4.11e-08,1;CL:0002042,4.11e-08,1;CL:0002039,4.11e-08,1;CL:0002040,4.11e-08,1;CL:0002041,4.11e-08,1;CL:0000766,1.16e-07,72;CL:0000860,3.36e-07,42;CL:0002057,3.36e-07,42;CL:0002031,3.61e-07,120;CL:0000738,3.77e-07,136 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1240!1.17e-11!39;DOID:2531!1.60e-11!51;DOID:0060083!1.60e-11!51;DOID:8692!4.45e-10!31 | |ontology_enrichment_disease=DOID:1240!1.17e-11!39;DOID:2531!1.60e-11!51;DOID:0060083!1.60e-11!51;DOID:8692!4.45e-10!31 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.29e-36!102;UBERON:0003061!4.29e-36!102;UBERON:0002193!1.61e-33!112;UBERON:0002371!1.58e-22!80;UBERON:0001474!6.73e-20!86;UBERON:0002405!2.27e-18!115;UBERON:0004765!1.16e-15!101;UBERON:0001434!1.16e-15!101;UBERON:0000178!5.79e-10!15;UBERON:0000179!5.79e-10!15;UBERON:0000463!5.79e-10!15;UBERON:0003081!2.89e-09!216;UBERON:0002384!1.11e-08!375;UBERON:0004177!8.49e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!4.29e-36!102;UBERON:0003061!4.29e-36!102;UBERON:0002193!1.61e-33!112;UBERON:0002371!1.58e-22!80;UBERON:0001474!6.73e-20!86;UBERON:0002405!2.27e-18!115;UBERON:0004765!1.16e-15!101;UBERON:0001434!1.16e-15!101;UBERON:0000178!5.79e-10!15;UBERON:0000179!5.79e-10!15;UBERON:0000463!5.79e-10!15;UBERON:0003081!2.89e-09!216;UBERON:0002384!1.11e-08!375;UBERON:0004177!8.49e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.51e-16;15!UBERON:0000179;2.51e-16;15!UBERON:0000463;2.51e-16;15!UBERON:0000029;3.20e-08;1!UBERON:0002390;1.90e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.51e-16;15!UBERON:0000179;2.51e-16;15!UBERON:0000463;2.51e-16;15!UBERON:0000029;3.20e-08;1!UBERON:0002390;1.90e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.29e-17,108;UBERON:0002390,1.14e-16,98;UBERON:0003061,1.14e-16,98;UBERON:0000178,2.75e-16,15;UBERON:0000179,2.75e-16,15;UBERON:0000463,2.75e-16,15;UBERON:0000029,2.50e-08,1;UBERON:0002405,3.03e-08,93;UBERON:0002371,3.52e-07,76 | |||
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|short_description=p@chr12:109017389..109017424,- | |short_description=p@chr12:109017389..109017424,- | ||
}} | }} |
Latest revision as of 04:38, 24 July 2015
Short description: | p@chr12:109017389..109017424, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109017389..109017424, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.00e-10 | 48 |
phagocyte | 4.00e-10 | 48 |
monopoietic cell | 1.13e-09 | 59 |
monocyte | 1.13e-09 | 59 |
monoblast | 1.13e-09 | 59 |
promonocyte | 1.13e-09 | 59 |
macrophage dendritic cell progenitor | 2.62e-09 | 61 |
nongranular leukocyte | 6.50e-09 | 115 |
myeloid lineage restricted progenitor cell | 1.71e-08 | 66 |
granulocyte monocyte progenitor cell | 2.41e-08 | 67 |
innate effector T cell | 4.11e-08 | 1 |
immature NK T cell | 4.11e-08 | 1 |
effector T cell | 4.11e-08 | 1 |
mature NK T cell | 4.11e-08 | 1 |
immature NK T cell stage IV | 4.11e-08 | 1 |
immature NK T cell stage I | 4.11e-08 | 1 |
immature NK T cell stage II | 4.11e-08 | 1 |
immature NK T cell stage III | 4.11e-08 | 1 |
myeloid leukocyte | 1.16e-07 | 72 |
classical monocyte | 3.36e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.36e-07 | 42 |
hematopoietic lineage restricted progenitor cell | 3.61e-07 | 120 |
leukocyte | 3.77e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.29e-17 | 108 |
hematopoietic system | 1.14e-16 | 98 |
blood island | 1.14e-16 | 98 |
blood | 2.75e-16 | 15 |
haemolymphatic fluid | 2.75e-16 | 15 |
organism substance | 2.75e-16 | 15 |
lymph node | 2.50e-08 | 1 |
immune system | 3.03e-08 | 93 |
bone marrow | 3.52e-07 | 76 |