FFCP PHASE1:Hg19::chr12:25240114..25240122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:25240114..25240122,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr12:25240114..25240122,+ | |description=CAGE_peak_at_chr12:25240114..25240122,+ | ||
|id=chr12:25240114..25240122,+ | |id=chr12:25240114..25240122,+ | ||
|ontology_enrichment_celltype=CL:0000945;1.05e-33;24!CL:0000542;3.93e-20;53!CL:0000236;9.30e-20;13!CL:0000738;7.99e-09;136!CL:0002087;1.64e-07;104!CL:0000988;1.74e-07;177!CL:0002393;2.99e-07;6!CL:0002397;2.99e-07;6!CL:0000775;9.31e-07;3 | |ontology_enrichment_celltype=CL:0000037!8.28e-46!172;CL:0000566!8.28e-46!172;CL:0000988!2.41e-43!182;CL:0002032!3.38e-43!165;CL:0000837!3.38e-43!165;CL:0000738!1.06e-38!140;CL:0002031!1.20e-33!124;CL:0002087!2.85e-33!119;CL:0000542!4.34e-28!53;CL:0000051!4.34e-28!53;CL:0000838!3.14e-27!52;CL:0000945!1.56e-20!24;CL:0000826!1.56e-20!24;CL:0000763!5.40e-17!112;CL:0000049!5.40e-17!112;CL:0000236!3.32e-12!14;CL:0000766!4.02e-12!76;CL:0000839!1.01e-09!70;CL:0000557!1.50e-09!71;CL:0002393!5.29e-08!9;CL:0002397!5.29e-08!9;CL:0002009!1.09e-07!65;CL:0002194!1.53e-07!63;CL:0000576!1.53e-07!63;CL:0000040!1.53e-07!63;CL:0000559!1.53e-07!63;CL:0000084!1.94e-07!25;CL:0000827!1.94e-07!25 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;1.05e-33;24!CL:0000542;3.93e-20;53!CL:0000236;9.30e-20;13!CL:0000738;7.99e-09;136!CL:0002087;1.64e-07;104!CL:0000988;1.74e-07;177!CL:0002393;2.99e-07;6!CL:0002397;2.99e-07;6!CL:0000775;9.31e-07;3 | ||
|ontology_enrichment_disease=DOID:0060058;1.66e-11;10!DOID:2531;3.12e-07;51!DOID:0060083;3.12e-07;51 | |ontology_enrichment_celltype_v019_2=CL:0000037,3.83e-39,168;CL:0000988,3.07e-37,177;CL:0002032,5.37e-36,161;CL:0000837,5.37e-36,161;CL:0000945,7.19e-34,24;CL:0000826,7.19e-34,24;CL:0000542,1.63e-33,53;CL:0000051,1.63e-33,53;CL:0000738,2.10e-33,136;CL:0000838,4.26e-32,52;CL:0002031,2.08e-27,120;CL:0002087,4.15e-27,115;CL:0000236,3.75e-21,14;CL:0002393,3.97e-11,9;CL:0002397,3.97e-11,9;CL:0000763,9.30e-10,108;CL:0000049,9.30e-10,108;CL:0000134,1.81e-08,354;CL:0002320,5.80e-08,361;CL:0000775,7.96e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0000178;1.21e-15;15!UBERON:0000179;1.21e-15;15!UBERON:0000463;1.21e-15;15!UBERON:0002390;4.58e-14;32!UBERON:0002193;9.13e-10;42 | |ontology_enrichment_development_v019=CL:0000051;3.93e-20;53 | ||
|ontology_enrichment_disease=DOID:2531!1.63e-12!51;DOID:0060083!1.63e-12!51;DOID:1240!4.27e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.66e-11;10!DOID:2531;3.12e-07;51!DOID:0060083;3.12e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.86e-13,51;DOID:0060083,1.86e-13,51;DOID:0060058,2.61e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.34e-26!115;UBERON:0002390!3.83e-19!102;UBERON:0003061!3.83e-19!102;UBERON:0002193!5.74e-18!112;UBERON:0000178!4.51e-12!15;UBERON:0000179!4.51e-12!15;UBERON:0000463!4.51e-12!15;UBERON:0001049!2.36e-09!57;UBERON:0005068!2.36e-09!57;UBERON:0006241!2.36e-09!57;UBERON:0007135!2.36e-09!57;UBERON:0002020!6.04e-09!34;UBERON:0003528!6.04e-09!34;UBERON:0002780!8.32e-09!41;UBERON:0001890!8.32e-09!41;UBERON:0006240!8.32e-09!41;UBERON:0001893!8.68e-09!34;UBERON:0002791!1.61e-08!33;UBERON:0002371!2.01e-08!80;UBERON:0003080!2.15e-08!42;UBERON:0002619!3.85e-08!22;UBERON:0001869!4.22e-08!32;UBERON:0002405!2.28e-07!115;UBERON:0002616!3.08e-07!59;UBERON:0001950!4.63e-07!20;UBERON:0001474!5.56e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-15;15!UBERON:0000179;1.21e-15;15!UBERON:0000463;1.21e-15;15!UBERON:0002390;4.58e-14;32!UBERON:0002193;9.13e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.72e-15,15;UBERON:0000179,1.72e-15,15;UBERON:0000463,1.72e-15,15;UBERON:0002390,5.43e-14,98;UBERON:0003061,5.43e-14,98;UBERON:0002193,1.07e-13,108;UBERON:0002384,2.78e-07,371;UBERON:0007023,6.66e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87058079203898,7.7174554082949,8.18592125662264,1.57345710739562,0.383829398097213,0.77408061658038,0,0,0,21.6133489619042,11.5157078314811,1.17440175733939,2.76997704265939,3.00816671205213,3.03815219002193,1.11957737119962,0.647787332037959,1.80302897343931,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.65156653411535,0,0.368277635987565,0,1.05627643155971,0.637812899895131,2.09658645508376,0.673971786878971,1.20141514273205,0.803627933485401,1.99508920618874,1.59133341759272,3.28795476776341,1.75996244461323,1.09227722252426,2.66852776159066,4.26730222566507,1.60158394814405,1.72425731986345,1.32208974556972,1.90810750907073,6.83055562931338,4.11066032559657,3.05818582500183,0,0.560508562981536,0.526768169550154,0.983548850569165,3.53709686474248,1.23360899399706,0,0,1.4203434172042,1.94826728407911,0.222820913770347,0,0.443067789167242,0,0.384273959177026,0.130059347559878,0.822189523018381,1.38175008892924,0.289803085735052,1.33457906845854,1.33770414044857,3.1360657141493,0.226618685395132,0.383220493601921,0.68725489096526,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0.821127996921047,1.41124720257313,2.94184215361858,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.696518949197069,0.531831842075461,1.43094374583205,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,7.50487269004906,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,1.40877494421162,2.07328115540772,1.8735593944205,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,1.2162378064119,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0.896681151948218,1.37921532141349,4.74380664690938,3.7219480521127,0.254094624222463,0,0,0,0,10.4860983352606,47.865833472644,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0.82707210449155,4.31428401637234,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.657779629937804,1.0457418040996,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,4.58782324285425,6.26611905891579,5.24109906007136,3.70226045777575,6.48473311192717,6.48037724685738,2.37937552888281,0,0,0,3.90186667764009,2.74111504655245,4.5530779742985,0.318852545457645,1.59663497146253,0,1.69338866179106,0.324621940274555,0,2.51058146936511,1.09675927041116,0,0.169291777801603,4.33587802779989,4.03599414382095,4.68430861459359,0.343505344755765,0.614481528616916,0.223676107892416,0,0.390776190804081,0,0,0.540911356951966,0,1.4098700508785,0.18714054040822,0,0,0,0,0,0,0,1.9882952955326,1.96937182974718,0,0,0,1.39473591775749,9.39365312805902,0,0,0.861593638227486,0,0,0,2.55786185113436,0.493217028184668,2.3948309234694,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,1.03423011972439,0,0,0.885741385813839,0.482385754501632,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,1.16348177330109,0,0,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.265372693510018,1.22206028986725,1.18608451472249,0.123563938946503,0.104421949505455,0.134802265961354,1.60515529459758,0,7.29819156862664,0,0,0.394584402849391,1.20990716048664,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,1.27746588066972,0,3.41753560563109,0,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,1.01607998478941,1.59045937961861,0.953423842781029,0,0,0,1.5748172408605,0,0.303747783290123,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0.79339561045614,0,0,0.213574825135389,0.471612915298998,1.24271716604159,4.46549419630756,2.56895121467328,8.40368928828182,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.500763722825999,0.573409195690071,0.998361463831671,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.163565394255844,0,0,0,2.59983614611409,0,2.58322469491223,0,0,0,0,0,0,0,0,0,0.637724760305049,0.123935764259002,0.558644917973244,0,25.3146201454023,0,0,0,0.19268767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| ||
|short_description=p@chr12:25240114..25240122,+ | |short_description=p@chr12:25240114..25240122,+ | ||
}} | }} |
Latest revision as of 07:45, 24 July 2015
Short description: | p@chr12:25240114..25240122, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:25240114..25240122, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.83e-39 | 168 |
hematopoietic cell | 3.07e-37 | 177 |
hematopoietic oligopotent progenitor cell | 5.37e-36 | 161 |
hematopoietic multipotent progenitor cell | 5.37e-36 | 161 |
lymphocyte of B lineage | 7.19e-34 | 24 |
pro-B cell | 7.19e-34 | 24 |
lymphocyte | 1.63e-33 | 53 |
common lymphoid progenitor | 1.63e-33 | 53 |
leukocyte | 2.10e-33 | 136 |
lymphoid lineage restricted progenitor cell | 4.26e-32 | 52 |
hematopoietic lineage restricted progenitor cell | 2.08e-27 | 120 |
nongranular leukocyte | 4.15e-27 | 115 |
B cell | 3.75e-21 | 14 |
intermediate monocyte | 3.97e-11 | 9 |
CD14-positive, CD16-positive monocyte | 3.97e-11 | 9 |
myeloid cell | 9.30e-10 | 108 |
common myeloid progenitor | 9.30e-10 | 108 |
mesenchymal cell | 1.81e-08 | 354 |
connective tissue cell | 5.80e-08 | 361 |
neutrophil | 7.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.72e-15 | 15 |
haemolymphatic fluid | 1.72e-15 | 15 |
organism substance | 1.72e-15 | 15 |
hematopoietic system | 5.43e-14 | 98 |
blood island | 5.43e-14 | 98 |
hemolymphoid system | 1.07e-13 | 108 |
connective tissue | 2.78e-07 | 371 |
adult organism | 6.66e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.86e-13 | 51 |
immune system cancer | 1.86e-13 | 51 |
lymphoma | 2.61e-11 | 10 |