FFCP PHASE1:Hg19::chr12:32717010..32717023,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:32717010..32717023,+ | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_at_chr12:32717010..32717023,+ | |description=CAGE_peak_at_chr12:32717010..32717023,+ | ||
|id=chr12:32717010..32717023,+ | |id=chr12:32717010..32717023,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.61e-46!7;CL:0000586!5.61e-46!7;CL:0002579!6.34e-08!3 | |ontology_enrichment_celltype=CL:0000039!5.61e-46!7;CL:0000586!5.61e-46!7;CL:0002579!6.34e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.43e-90;7!CL:0000586;4.43e-90;7!CL:0000235;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.43e-90,7;CL:0000586,4.43e-90,7;CL:0000235,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.16e-63;10!UBERON:0005564;2.16e-63;10 | |||
|ontology_enrichment_disease=DOID:3095!5.57e-15!22;DOID:2994!5.57e-15!22 | |ontology_enrichment_disease=DOID:3095!5.57e-15!22;DOID:2994!5.57e-15!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.36e-29;22!DOID:2994;2.36e-29;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.36e-29,22;DOID:2994,2.36e-29,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.60e-40!8;UBERON:0003135!1.76e-29!11;UBERON:0000991!1.13e-15!21;UBERON:0009196!1.13e-15!21;UBERON:0009117!1.13e-15!21;UBERON:0005564!1.13e-15!21;UBERON:0004176!5.57e-15!22;UBERON:0003101!5.57e-15!22;UBERON:0000079!5.57e-15!22;UBERON:0002323!5.09e-11!46;UBERON:0004458!2.37e-10!49;UBERON:0003886!4.56e-08!63;UBERON:0002553!2.90e-07!70;UBERON:0003133!4.81e-07!48 | |ontology_enrichment_uberon=UBERON:0000473!2.60e-40!8;UBERON:0003135!1.76e-29!11;UBERON:0000991!1.13e-15!21;UBERON:0009196!1.13e-15!21;UBERON:0009117!1.13e-15!21;UBERON:0005564!1.13e-15!21;UBERON:0004176!5.57e-15!22;UBERON:0003101!5.57e-15!22;UBERON:0000079!5.57e-15!22;UBERON:0002323!5.09e-11!46;UBERON:0004458!2.37e-10!49;UBERON:0003886!4.56e-08!63;UBERON:0002553!2.90e-07!70;UBERON:0003133!4.81e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.79e-79;8!UBERON:0003135;9.98e-58;11!UBERON:0000991;1.04e-30;21!UBERON:0003101;2.36e-29;22!UBERON:0000079;2.36e-29;22!UBERON:0002323;9.36e-14;45!UBERON:0003133;2.56e-11;44!UBERON:0000922;6.27e-11;49!UBERON:0002553;5.39e-09;52!UBERON:0004458;7.94e-08;48!UBERON:0005156;1.97e-07;59!UBERON:0000990;1.97e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.79e-79,8;UBERON:0003135,9.98e-58,11;UBERON:0000991,1.04e-30,21;UBERON:0009196,1.04e-30,21;UBERON:0009117,1.04e-30,21;UBERON:0005564,1.04e-30,21;UBERON:0004176,2.36e-29,22;UBERON:0003101,2.36e-29,22;UBERON:0000079,2.36e-29,22;UBERON:0002323,1.83e-14,46;UBERON:0003133,6.82e-14,48;UBERON:0004458,1.27e-13,49;UBERON:0003886,1.98e-12,54;UBERON:0005156,1.96e-11,59;UBERON:0000990,1.96e-11,59;UBERON:0002553,4.41e-11,61 | |||
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|short_description=p@chr12:32717010..32717023,+ | |short_description=p@chr12:32717010..32717023,+ | ||
}} | }} |
Latest revision as of 08:14, 24 July 2015
Short description: | p@chr12:32717010..32717023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:32717010..32717023, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.43e-90 | 7 |
germ cell | 4.43e-90 | 7 |
macrophage | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 5.79e-79 | 8 |
male reproductive organ | 9.98e-58 | 11 |
gonad | 1.04e-30 | 21 |
indifferent external genitalia | 1.04e-30 | 21 |
indifferent gonad | 1.04e-30 | 21 |
gonad primordium | 1.04e-30 | 21 |
external genitalia | 2.36e-29 | 22 |
male organism | 2.36e-29 | 22 |
male reproductive system | 2.36e-29 | 22 |
body cavity | 1.83e-14 | 46 |
reproductive organ | 6.82e-14 | 48 |
body cavity or lining | 1.27e-13 | 49 |
body cavity precursor | 1.98e-12 | 54 |
reproductive structure | 1.96e-11 | 59 |
reproductive system | 1.96e-11 | 59 |
anatomical cavity | 4.41e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.36e-29 | 22 |
germ cell cancer | 2.36e-29 | 22 |