FFCP PHASE1:Hg19::chr12:52908461..52908496,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52908461..52908496,+
|short_description=p2@CU687195
|description=CAGE_peak_2_at_CU687195_5end
|association_with_transcript=-230bp_to_CU687195_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-230bp_to_CU687195_5end | |||
|cluster_id=chr12:52908461..52908496,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_2_at_CU687195_5end | |||
|id=chr12:52908461..52908496,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.06e-28!43;CL:0002159!1.77e-21!13;CL:0000066!1.59e-19!254;CL:0002251!1.66e-19!21;CL:0000223!7.10e-19!59;CL:0002368!2.30e-12!13;CL:0000244!4.26e-12!4;CL:0000731!4.26e-12!4;CL:0000076!2.22e-11!62;CL:0002077!1.97e-10!33;CL:0002166!1.01e-09!3;CL:0000622!1.93e-09!5;CL:0002621!2.38e-09!3;CL:0000362!3.77e-09!8;CL:0002328!4.53e-09!3;CL:0000240!1.58e-08!6;CL:0000311!1.58e-08!6;CL:0000079!1.58e-08!6;CL:0000237!1.58e-08!6;CL:0000036!1.58e-08!6;CL:0000357!1.58e-08!6;CL:0000114!1.58e-08!6;CL:0000154!7.35e-08!6;CL:0002327!1.41e-07!4;CL:0000575!2.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.39e-25;14!CL:0002076;5.40e-22;42!CL:0002251;1.76e-16;20!CL:0002166;2.54e-14;3!CL:0002621;8.16e-14;3!CL:0000240;6.35e-13;6!CL:0000311;6.35e-13;6!CL:0000079;6.35e-13;6!CL:0000237;6.35e-13;6!CL:0002077;2.21e-12;34!CL:0002327;2.82e-11;4!CL:0000244;4.32e-11;4!CL:0000731;4.32e-11;4!CL:0000575;8.08e-11;2!CL:0000312;3.69e-09;5!CL:0000622;1.29e-08;5!CL:0000362;1.62e-08;9!CL:0002368;3.56e-08;13!CL:0002577;2.29e-07;3!CL:0000154;3.00e-07;6!CL:0002231;5.47e-07;3!CL:0002623;6.95e-07;3!CL:0002328;9.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.16e-25,14;CL:0002076,2.74e-23,42;CL:0000066,5.39e-18,253;CL:0002251,1.24e-16,20;CL:0000223,7.30e-16,58;CL:0002166,1.98e-14,3;CL:0002077,2.24e-14,34;CL:0002621,7.64e-14,3;CL:0000240,6.26e-13,6;CL:0000311,6.26e-13,6;CL:0000079,6.26e-13,6;CL:0000237,6.26e-13,6;CL:0000036,6.26e-13,6;CL:0000357,6.26e-13,6;CL:0000114,6.26e-13,6;CL:0002327,2.87e-11,4;CL:0000244,4.96e-11,4;CL:0000731,4.96e-11,4;CL:0000575,8.28e-11,2;CL:0000312,3.70e-09,5;CL:0000622,1.06e-08,5;CL:0000362,1.57e-08,9;CL:0002368,4.41e-08,13;CL:0002577,2.19e-07,3;CL:0000154,2.55e-07,6;CL:0002231,5.31e-07,3;CL:0002623,5.82e-07,3;CL:0002321,6.56e-07,250;CL:0002328,9.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;6.35e-13;6!CL:0000114;6.35e-13;6!CL:0000223;3.07e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!5.36e-17!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!1.51e-16!21;UBERON:0001004!2.07e-15!72;UBERON:0000161!2.69e-14!35;UBERON:0000165!5.19e-14!28;UBERON:0000930!5.19e-14!28;UBERON:0003729!1.15e-13!5;UBERON:0004119!1.24e-13!169;UBERON:0000925!1.24e-13!169;UBERON:0006595!1.24e-13!169;UBERON:0003102!4.51e-11!95;UBERON:0003343!6.54e-11!4;UBERON:0004785!6.54e-11!4;UBERON:0006562!1.29e-10!11;UBERON:0001444!9.52e-10!48;UBERON:0000365!1.14e-09!5;UBERON:0001949!2.38e-09!3;UBERON:0004815!4.53e-09!3;UBERON:0002031!4.53e-09!3;UBERON:0000065!5.33e-09!53;UBERON:0005631!6.50e-09!14;UBERON:0000158!6.50e-09!14;UBERON:0001042!7.44e-09!10;UBERON:0009145!7.44e-09!10;UBERON:0000974!9.04e-09!10;UBERON:0001723!1.15e-08!3;UBERON:0001033!1.15e-08!3;UBERON:0010056!1.15e-08!3;UBERON:0005910!4.74e-08!6;UBERON:0000344!1.14e-07!12;UBERON:0001911!1.41e-07!4;UBERON:0005333!1.41e-07!4;UBERON:0008425!1.41e-07!4;UBERON:0005311!1.41e-07!4;UBERON:0001708!2.26e-07!4;UBERON:0001704!2.26e-07!4;UBERON:0002185!6.85e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.14e-16;28!UBERON:0001949;8.16e-14;3!UBERON:0000161;1.85e-13;19!UBERON:0000166;1.85e-13;19!UBERON:0000486;4.78e-13;12!UBERON:0003729;1.15e-11;13!UBERON:0001911;2.82e-11;4!UBERON:0001708;7.31e-11;4!UBERON:0008895;7.31e-11;4!UBERON:0000344;7.53e-10;20!UBERON:0000365;5.86e-09;5!UBERON:0011159;8.88e-09;5!UBERON:0000033;7.32e-08;50!UBERON:0007811;8.99e-08;52!UBERON:0001444;1.08e-07;48!UBERON:0005910;1.57e-07;6!UBERON:0001043;4.05e-07;3!UBERON:0004815;9.35e-07;3!UBERON:0002031;9.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.94e-19,99;UBERON:0000166,6.09e-18,22;UBERON:0000033,8.47e-17,56;UBERON:0000165,3.97e-16,29;UBERON:0000930,3.97e-16,29;UBERON:0000161,4.81e-15,36;UBERON:0000153,8.01e-15,62;UBERON:0007811,8.01e-15,62;UBERON:0001949,7.64e-14,3;UBERON:0001444,1.40e-12,49;UBERON:0003729,8.91e-12,13;UBERON:0004119,1.82e-11,160;UBERON:0000925,1.82e-11,160;UBERON:0006595,1.82e-11,160;UBERON:0001911,2.87e-11,4;UBERON:0005333,2.87e-11,4;UBERON:0008425,2.87e-11,4;UBERON:0005311,2.87e-11,4;UBERON:0001708,6.08e-11,4;UBERON:0008895,6.08e-11,4;UBERON:0000344,6.76e-10,20;UBERON:0001004,7.62e-10,74;UBERON:0000365,6.53e-09,5;UBERON:0011159,7.67e-09,5;UBERON:0005910,1.71e-07,6;UBERON:0010188,1.96e-07,6;UBERON:0002539,1.96e-07,6;UBERON:0008816,1.96e-07,6;UBERON:0001043,4.05e-07,3;UBERON:0009143,4.05e-07,3;UBERON:0004815,9.63e-07,3;UBERON:0002031,9.63e-07,3 | |||
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| ||
|short_description=p2@CU687195 | |||
}} | }} |
Latest revision as of 09:34, 24 July 2015
Short description: | p2@CU687195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU687195_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -230bp_to_CU687195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.16e-25 | 14 |
endo-epithelial cell | 2.74e-23 | 42 |
epithelial cell | 5.39e-18 | 253 |
epithelial cell of alimentary canal | 1.24e-16 | 20 |
endodermal cell | 7.30e-16 | 58 |
epithelial cell of Malassez | 1.98e-14 | 3 |
ecto-epithelial cell | 2.24e-14 | 34 |
gingival epithelial cell | 7.64e-14 | 3 |
stratified squamous epithelial cell | 6.26e-13 | 6 |
keratin accumulating cell | 6.26e-13 | 6 |
stratified epithelial cell | 6.26e-13 | 6 |
keratinizing barrier epithelial cell | 6.26e-13 | 6 |
epithelial fate stem cell | 6.26e-13 | 6 |
stratified epithelial stem cell | 6.26e-13 | 6 |
surface ectodermal cell | 6.26e-13 | 6 |
mammary gland epithelial cell | 2.87e-11 | 4 |
transitional epithelial cell | 4.96e-11 | 4 |
urothelial cell | 4.96e-11 | 4 |
corneal epithelial cell | 8.28e-11 | 2 |
keratinocyte | 3.70e-09 | 5 |
acinar cell | 1.06e-08 | 5 |
epidermal cell | 1.57e-08 | 9 |
respiratory epithelial cell | 4.41e-08 | 13 |
placental epithelial cell | 2.19e-07 | 3 |
protein secreting cell | 2.55e-07 | 6 |
epithelial cell of prostate | 5.31e-07 | 3 |
acinar cell of salivary gland | 5.82e-07 | 3 |
embryonic cell | 6.56e-07 | 250 |
bronchial epithelial cell | 9.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.94e-19 | 99 |
oral opening | 6.09e-18 | 22 |
head | 8.47e-17 | 56 |
mouth | 3.97e-16 | 29 |
stomodeum | 3.97e-16 | 29 |
orifice | 4.81e-15 | 36 |
anterior region of body | 8.01e-15 | 62 |
craniocervical region | 8.01e-15 | 62 |
gingival epithelium | 7.64e-14 | 3 |
subdivision of head | 1.40e-12 | 49 |
mouth mucosa | 8.91e-12 | 13 |
endoderm-derived structure | 1.82e-11 | 160 |
endoderm | 1.82e-11 | 160 |
presumptive endoderm | 1.82e-11 | 160 |
mammary gland | 2.87e-11 | 4 |
mammary bud | 2.87e-11 | 4 |
mammary ridge | 2.87e-11 | 4 |
mammary placode | 2.87e-11 | 4 |
jaw skeleton | 6.08e-11 | 4 |
splanchnocranium | 6.08e-11 | 4 |
mucosa | 6.76e-10 | 20 |
respiratory system | 7.62e-10 | 74 |
urothelium | 6.53e-09 | 5 |
primary subdivision of cranial skeletal system | 7.67e-09 | 5 |
transitional epithelium | 1.71e-07 | 6 |
protuberance | 1.96e-07 | 6 |
pharyngeal arch | 1.96e-07 | 6 |
embryonic head | 1.96e-07 | 6 |
esophagus | 4.05e-07 | 3 |
esophageal region | 4.05e-07 | 3 |
lower respiratory tract epithelium | 9.63e-07 | 3 |
epithelium of bronchus | 9.63e-07 | 3 |